RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 TMEM80Q96HE8 168 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 CSF2P04141 144 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 CD83Q01151 205 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 CCINQ13939 588 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 ATG9BQ674R7 924 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 TOMM5Q8N4H5 51 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 FANK1Q8TC84 345 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 ERMAPQ96PL5 475 aaPredicted RBP18.05■□□□□ 0.48
MBD3-201ENST00000156825 DOHHQ9BU89 302 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 ZBTB20Q9HC78 741 aaPredicted RBP18.05■□□□□ 0.48
MBD3-201ENST00000156825 MAU2Q9Y6X3 613 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 FAM221BA6H8Z2 402 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 SLC6A6P31641 620 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 ZNF41P51814 821 aaPredicted RBP18.05■□□□□ 0.48
MBD3-201ENST00000156825 LETMD1Q6P1Q0 360 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 MACROD1Q9BQ69 325 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 SPATA6Q9NWH7 488 aaPredicted RBP18.05■□□□□ 0.48
MBD3-201ENST00000156825 HYKKA2RU49 373 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 FOXD2O60548 495 aaPredicted RBP18.04■□□□□ 0.48
MBD3-201ENST00000156825 CBFBQ13951 182 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 TMED4Q7Z7H5 227 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 AVL9Q8NBF6 648 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 G3V2L1 256 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 PPP6CO00743 305 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 ABCB7O75027 752 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 IL4RP24394 825 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 PRDX3P30048 256 aaKnown RBP18.04■□□□□ 0.48
MBD3-201ENST00000156825 GRPRP30550 384 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 LIPKQ5VXJ0 399 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 PEX11GQ96HA9 241 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 LAMP5Q9UJQ1 280 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 SH3D21A4FU49 640 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 OR2B3O76000 313 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 RAB36O95755 333 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 DNM1P34Q6PK57 102 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 ZNF782Q6ZMW2 699 aaPredicted RBP18.04■□□□□ 0.48
MBD3-201ENST00000156825 GPR26Q8NDV2 337 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 CCDC54Q8NEL0 328 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 ZDHHC12Q96GR4 267 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 PDE7BQ9NP56 450 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 ZNF224Q9NZL3 707 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 MGAT4BQ9UQ53 548 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 SEMA3DO95025 777 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 HCKP08631 526 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 ZNF12P17014 697 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 SLC15A1P46059 708 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 MAN2A2P49641 1150 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 TMEM225Q6GV28 225 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 NSMAFQ92636 917 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 YTHDF1Q9BYJ9 559 aaKnown RBP18.04■□□□□ 0.48
MBD3-201ENST00000156825 SRA1Q9HD15 236 aaKnown RBP18.04■□□□□ 0.48
MBD3-201ENST00000156825 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.04■□□□□ 0.48
MBD3-201ENST00000156825 IGSF5Q9NSI5 407 aa18.04■□□□□ 0.48
MBD3-201ENST00000156825 CCM2LQ9NUG4 571 aaPredicted RBP18.04■□□□□ 0.48
MBD3-201ENST00000156825 SLC16A5O15375 505 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 FAM189A1O60320 539 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 CSTBP04080 98 aaKnown RBP18.03■□□□□ 0.48
MBD3-201ENST00000156825 SPARCP09486 303 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 VAMP1P23763 118 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 PITPNAQ00169 270 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 ZNF773Q6PK81 442 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 MDGA1Q8NFP4 955 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 RIT1Q92963 219 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 RNF38Q9H0F5 515 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 ZNF639Q9UID6 485 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 MVKQ03426 396 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 ZNF234Q14588 700 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 STX12Q86Y82 276 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 LINC00471Q8N535 108 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 PNLDC1Q8NA58 520 aaKnown RBP18.03■□□□□ 0.48
MBD3-201ENST00000156825 CCDC120Q96HB5 630 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 HSPA12BQ96MM6 686 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 IRF2BPLQ9H1B7 796 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 IL17CQ9P0M4 197 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 ERVK-18Q9QC07 812 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 ANHXE9PGG2 379 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 SHC2P98077 582 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 ATP6AP1Q15904 470 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 SLC36A4Q6YBV0 504 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 KLHDC8AQ8IYD2 350 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 OSTF1Q92882 214 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 PIM1P11309 404 aaPredicted RBP18.03■□□□□ 0.48
MBD3-201ENST00000156825 LRIT3Q3SXY7 679 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 SLC22A16Q86VW1 577 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 CXXC1Q9P0U4 656 aaPredicted RBP18.03■□□□□ 0.48
MBD3-201ENST00000156825 MYH15Q9Y2K3 1946 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 CAPN14A8MX76 684 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 SOCS2O14508 198 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 ARL6IP5O75915 188 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 PFKLP17858 780 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 RIN1Q13671 783 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 UGT8Q16880 541 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 COMMD6Q7Z4G1 85 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 EHD1Q9H4M9 534 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 UPB1Q9UBR1 384 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 PCDHGB1Q9Y5G3 927 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 PCDHGA2Q9Y5H1 932 aa18.03■□□□□ 0.48
MBD3-201ENST00000156825 A0A1W2PPL8 197 aa18.02■□□□□ 0.48
MBD3-201ENST00000156825 ENTPD6O75354 484 aa18.02■□□□□ 0.48
MBD3-201ENST00000156825 IL33O95760 270 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms