RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Tcf25Q8R3L2 676 aaKnown RBP14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 DutQ8VCG1 200 aaKnown RBP14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Zfyve21Q8VCM3 234 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Tmem168Q91VX9 697 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Asb6Q91ZU1 418 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 TympQ99N42 471 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 AnkhQ9JHZ2 492 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Olfr71Q9QZ18 312 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 AgtrapQ9WVK0 161 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Gm15013V9GWY0 266 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Trav1A0A075B5Z4 110 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Gm5938A2AEN9 163 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Tyw5A2RSX7 315 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Gm5724L7N264 670 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Cldn4O35054 210 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Hmox2O70252 315 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Ptpn22P29352 802 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Cxcr4P70658 359 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Scgb1a1Q06318 96 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Elfn2Q68FM6 823 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Adgrd1Q80T32 903 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Carnmt1Q80UY1 400 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Zbtb42Q811H0 420 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Slc39a9Q8BFU1 308 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 C8bQ8BH35 589 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Rab39aQ8BHD0 217 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Slc8a2Q8K596 921 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Mterf3Q8R3J4 412 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Olfr811Q8VFI1 319 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Ccdc81Q9D5W4 654 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Cbll1Q9JIY2 491 aa14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Hapln1Q9QUP5 356 aaKnown RBP14.94□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Zfp811A0A0J9YU71 552 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Hpse2B2RY83 592 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Arhgap40E9Q6X9 672 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Ccdc149F6V035 524 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Sh3yl1O08641 340 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Serpinb9eO08806 377 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 P18533 117 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 GcgP55095 180 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 InhaQ04997 366 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Gdf9Q07105 441 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Xkr9Q5GH62 373 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Prrg3Q6PAQ9 231 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 AptxQ7TQC5 342 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Zc3hav1lQ8BFR1 296 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Palm2Q8BR92 376 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Sidt2Q8CIF6 832 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Olfr441Q8VFS5 310 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Acot7Q91V12 381 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 AmnQ99JB7 458 aaKnown RBP14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Lims1Q99JW4 325 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Use1Q9CQ56 270 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Rnase10Q9D5A9 208 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Clca3a2Q9EQR4 902 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Sult2a6B2RVI8 285 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Kif28pD3YXS5 1028 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Gm17019K7N6W5 255 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 CatP24270 527 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Dmrtc1bQ2PMX6 267 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Defb23Q30KP0 166 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Ankrd28Q505D1 1053 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Olfr1318Q7TQW6 320 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Spon2Q8BMS2 330 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Sall4Q8BX22 1067 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 RhdQ8CF94 418 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 D2hgdhQ8CIM3 535 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Zbtb20Q8K0L9 741 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Polr1eQ8K202 482 aaKnown RBP14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Prokr2Q8K458 381 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Olfr1317Q8VF84 316 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 2310003L06RikQ9CV82 495 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Hcar2Q9EP66 360 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Vmn1r29Q9EQ41 303 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Sphk2Q9JIA7 617 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Nectin3Q9JLB9 549 aa14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Arpc3Q9JM76 178 aaKnown RBP14.93□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Ndor1A2AI05 598 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Olfr1123A2AT85 323 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Gm8926L7MUE8 181 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Cyp4a14O35728 507 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Timp2P25785 220 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 DbtP53395 482 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 PtpaP58389 323 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Rad51Q08297 339 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 B4galnt2Q09199 510 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Samd12Q0VE29 161 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Fcho2Q3UQN2 809 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Map4k2Q61161 821 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Adam29Q811Q4 763 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Scara5Q8K299 491 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Ccm2Q8K2Y9 453 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Uhrf1Q8VDF2 782 aaKnown RBP14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Olfr1278Q8VF39 313 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Olfr1414Q8VGU5 312 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Mcemp1Q9D8U6 183 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Igkv10-95A0A0G2JFY3 115 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 Gm5141A0A0J9YUW3 581 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 A0A286YDU1 74 aa14.92□□□□□ -0.02
Sdc1-205ENSMUST00000171158 A430033K04RikE9Q8G5 680 aa14.92□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms