RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Olfr818Q8VG46 318 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 NoboxQ8VIH1 527 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 As3mtQ91WU5 376 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Fam32aQ9CR80 112 aaKnown RBP15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Socs6Q9JLY0 533 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Nup210Q9QY81 1886 aaKnown RBP15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Kctd14A0A0U1RNG7 287 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 CerklA2AQH1 525 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 PpigA2AR02 752 aaKnown RBP15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Nxpe3B9EKK6 559 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Ccl26F8VQM2 93 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Vmn2r12L7N217 831 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Anxa3O35639 323 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 P01675 107 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 P01676 107 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 P01677 107 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 P01678 107 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Coq8bQ566J8 533 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Zc3h12aQ5D1E7 596 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Taar7aQ5QD12 358 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Nr1h4Q60641 488 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Klra2Q60660 288 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 GkQ64516 559 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Crb2Q80YA8 1282 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Q8BGK9 164 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Peli2Q8BST6 419 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Mblac1Q8BWY4 260 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Camk1gQ91VB2 477 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Lsm7Q9CQQ8 103 aaKnown RBP15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Rpl4Q9D8E6 419 aaKnown RBP15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Nek6Q9ES70 313 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Tyk2Q9R117 1184 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Zfp383A0A087WRR7 490 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Lcn11A2BHR2 178 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 4930444G20RikD3Z741 495 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Vmn2r7E9PYL5 915 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Spata31d1cE9QAF1 853 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Vmn2r4K7N784 913 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Tk1P04184 233 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 MbP04247 154 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 AcrP23578 436 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Alox12P39655 663 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Sox3P53784 375 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Q3UST5 385 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Zp1Q62005 623 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 BC080695Q66JY9 481 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Syt16Q7TN83 639 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Elp6Q8BK75 266 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Znf628Q8CJ78 1038 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Adgrg1Q8K209 687 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Cbx7Q8VDS3 158 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Olfr622Q8VGY7 317 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Gimap3Q99MI6 301 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Mrpl54Q9CPW3 135 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Wdr55Q9CX97 388 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Snx7Q9CY18 387 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Pdzk1Q9JIL4 519 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Upk3aQ9JKX8 287 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 TrioQ0KL02 3102 aa15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 BC025446A0A087WQT1 134 aa15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 Vmn2r106E9PY92 862 aa15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 EnpepP16406 945 aa15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 Bmp4P21275 408 aa15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 Kcnj5P48545 419 aa15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 Rack1P68040 317 aaKnown RBP15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 B4galnt2Q09199 510 aa15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 Prelid2Q0VBB0 177 aa15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 LpoQ5SW46 710 aa15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 Znf516Q7TSH3 1157 aa15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 Q810M1 233 aa15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 Q8BL95 290 aa15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 Ift80Q8K057 777 aa15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 Vmn1r69Q8VIC1 319 aa15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 Cstf3Q99LI7 717 aaKnown RBP15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 Sacm1lQ9EP69 587 aa15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 Ropn1lQ9EQ00 218 aa15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 Akr1a1Q9JII6 325 aa15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 Slc5a3Q9JKZ2 718 aa15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 Acss2Q9QXG4 701 aa15.71■□□□□ 0.11
Shh-201ENSMUST00000002708 BC034090A0A087WP46 1202 aa15.71■□□□□ 0.1
Shh-201ENSMUST00000002708 Gm13283A0A087WPG5 182 aa15.71■□□□□ 0.1
Shh-201ENSMUST00000002708 Esp31A8R0W3 114 aa15.71■□□□□ 0.1
Shh-201ENSMUST00000002708 Pdzd8B9EJ80 1147 aa15.71■□□□□ 0.1
Shh-201ENSMUST00000002708 Gm7945F6QI24 236 aa15.71■□□□□ 0.1
Shh-201ENSMUST00000002708 Gm5571P01639 130 aa15.71■□□□□ 0.1
Shh-201ENSMUST00000002708 Tuba1bP05213 451 aa15.71■□□□□ 0.1
Shh-201ENSMUST00000002708 Rc3h2P0C090 1187 aaKnown RBP15.71■□□□□ 0.1
Shh-201ENSMUST00000002708 Ruvbl1P60122 456 aaKnown RBP15.71■□□□□ 0.1
Shh-201ENSMUST00000002708 Tuba1aP68369 451 aa15.71■□□□□ 0.1
Shh-201ENSMUST00000002708 Sox14Q04892 240 aa15.71■□□□□ 0.1
Shh-201ENSMUST00000002708 Agfg1Q8K2K6 561 aa15.71■□□□□ 0.1
Shh-201ENSMUST00000002708 TmieQ8K467 153 aa15.71■□□□□ 0.1
Shh-201ENSMUST00000002708 Irak4Q8R4K2 459 aa15.71■□□□□ 0.1
Shh-201ENSMUST00000002708 Tmem98Q91X86 226 aa15.71■□□□□ 0.1
Shh-201ENSMUST00000002708 NrarpQ91ZA8 114 aa15.71■□□□□ 0.1
Shh-201ENSMUST00000002708 Ppp1r16aQ923M0 524 aa15.71■□□□□ 0.1
Shh-201ENSMUST00000002708 Mrps33Q9D2R8 106 aa15.71■□□□□ 0.1
Shh-201ENSMUST00000002708 Sec23bQ9D662 767 aa15.71■□□□□ 0.1
Shh-201ENSMUST00000002708 2010005H15RikQ9D8D6 97 aa15.71■□□□□ 0.1
Shh-201ENSMUST00000002708 Trpm6Q8CIR4 2028 aa15.71■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 51 ms