RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 TSFMP43897 325 aaKnown RBP12.43□□□□□ -0.42
PHGDH-221ENST00000641573 GSK3BP49841 420 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 GFERP55789 205 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 MTPNP58546 118 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 BTN3A2P78410 334 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 LIPEQ05469 1076 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 SLAMF1Q13291 335 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 TRIM25Q14258 630 aaKnown RBP12.43□□□□□ -0.42
PHGDH-221ENST00000641573 SLC9A5Q14940 896 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 HEPACAMQ14CZ8 416 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 PRSS53Q2L4Q9 553 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 MUM1Q2TAK8 710 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 ZCCHC8Q6NZY4 707 aaKnown RBP12.43□□□□□ -0.42
PHGDH-221ENST00000641573 TICAM1Q8IUC6 712 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 CLECL1Q8IZS7 167 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 MMP21Q8N119 569 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 ACOT4Q8N9L9 421 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 HIPK4Q8NE63 616 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 VPS37AQ8NEZ2 397 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 ZCCHC10Q8TBK6 192 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 UTP15Q8TED0 518 aaKnown RBP12.43□□□□□ -0.42
PHGDH-221ENST00000641573 NCSTNQ92542 709 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 STMN2Q93045 179 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 ZDHHC12Q96GR4 267 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 AHCYL2Q96HN2 611 aaKnown RBP12.43□□□□□ -0.42
PHGDH-221ENST00000641573 CCDC115Q96NT0 180 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 TGM7Q96PF1 710 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 GBP5Q96PP8 586 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 PANX1Q96RD7 426 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 MAP3K3Q99759 626 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 RAB33BQ9H082 229 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 GAREM1Q9H706 876 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 COPS7BQ9H9Q2 264 aaPredicted RBP12.43□□□□□ -0.42
PHGDH-221ENST00000641573 FAM60AQ9NP50 221 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 MIEF1Q9NQG6 463 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 SLC6A13Q9NSD5 602 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 TEX10Q9NXF1 929 aaPredicted RBP12.43□□□□□ -0.42
PHGDH-221ENST00000641573 EPHA6Q9UF33 1036 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 PRDM4Q9UKN5 801 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 PADI4Q9UM07 663 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 PCDHB14Q9Y5E9 798 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 CFAP46Q8IYW2 2715 aa12.43□□□□□ -0.42
PHGDH-221ENST00000641573 HEATR5BQ9P2D3 2071 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 IGHV1OR21-1A0A087WYE8 117 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 URADA6NGE7 173 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 RNASET2O00584 256 aaKnown RBP12.42□□□□□ -0.42
PHGDH-221ENST00000641573 ACOT8O14734 319 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 B4GAT1O43505 415 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 KIF1CO43896 1103 aaKnown RBP12.42□□□□□ -0.42
PHGDH-221ENST00000641573 BCAS2O75934 225 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-221ENST00000641573 KRT36O76013 467 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 PSMG1O95456 288 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 EIF2S1P05198 315 aaKnown RBP12.42□□□□□ -0.42
PHGDH-221ENST00000641573 SMIM10L1P0DMW3 83 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 DDX5P17844 614 aaKnown RBP12.42□□□□□ -0.42
PHGDH-221ENST00000641573 CERS1P27544 350 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 PTPN6P29350 595 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 GPR3P46089 330 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 ALDH9A1P49189 494 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 ERFP50548 548 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 CCT8P50990 548 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 LRRC74AQ0VAA2 488 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 TRAP1Q12931 704 aaKnown RBP12.42□□□□□ -0.42
PHGDH-221ENST00000641573 FLOT2Q14254 428 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 NR1D2Q14995 579 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 NR0B2Q15466 257 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 SNCBQ16143 134 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 ZC3H12BQ5HYM0 836 aaKnown RBP12.42□□□□□ -0.42
PHGDH-221ENST00000641573 MANEAQ5SRI9 462 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 MRM1Q6IN84 353 aaKnown RBP12.42□□□□□ -0.42
PHGDH-221ENST00000641573 MCATQ8IVS2 390 aaKnown RBP12.42□□□□□ -0.42
PHGDH-221ENST00000641573 DNAJC22Q8N4W6 341 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 ZNF655Q8N720 491 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-221ENST00000641573 CSNK1A1LQ8N752 337 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 Q8N9G6 341 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-221ENST00000641573 FAM47BQ8NA70 645 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 LSM14AQ8ND56 463 aaKnown RBP12.42□□□□□ -0.42
PHGDH-221ENST00000641573 OR4C6Q8NH72 309 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 JADE3Q92613 823 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 CIDECQ96AQ7 238 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-221ENST00000641573 ASB9Q96DX5 294 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 TCTN2Q96GX1 697 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 SMIM10Q96HG1 83 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 CD180Q99467 661 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 CDC6Q99741 560 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 SH3GL1Q99961 368 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 CCDC3Q9BQI4 270 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 CPPED1Q9BRF8 314 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-221ENST00000641573 THUMPD3Q9BV44 507 aaKnown RBP12.42□□□□□ -0.42
PHGDH-221ENST00000641573 FAIM2Q9BWQ8 316 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 ROGDIQ9GZN7 287 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 PCDHAC1Q9H158 963 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 RASSF4Q9H2L5 321 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 EPB41L1Q9H4G0 881 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 LYARQ9NX58 379 aaKnown RBP12.42□□□□□ -0.42
PHGDH-221ENST00000641573 BCAP29Q9UHQ4 241 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 AP3M1Q9Y2T2 418 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 ASB4Q9Y574 426 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 TMEM131Q92545 1883 aa12.42□□□□□ -0.42
PHGDH-221ENST00000641573 SNRNP200O75643 2136 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms