RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 SLC35C2Q9NQQ7 365 aa16.4■□□□□ 0.22
PHGDH-208ENST00000641023 ADPRHL2Q9NX46 363 aa16.4■□□□□ 0.22
PHGDH-208ENST00000641023 KLK4Q9Y5K2 254 aa16.4■□□□□ 0.22
PHGDH-208ENST00000641023 A0A0J9YVX5 310 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 G3V2T6 193 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 NME1P15531 152 aaKnown RBP16.39■□□□□ 0.21
PHGDH-208ENST00000641023 CERS1P27544 350 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 MAGEA2P43356 314 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 RPS9P46781 194 aaKnown RBP16.39■□□□□ 0.21
PHGDH-208ENST00000641023 CASP9P55211 416 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 MLLT1Q03111 559 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-208ENST00000641023 HSPB3Q12988 150 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 ZDHHC21Q8IVQ6 265 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 KCT2Q8NC54 265 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 OR10Q1Q8NGQ4 319 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 TFAP2CQ92754 450 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 TM4SF19Q96DZ7 209 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 ZFYVE21Q9BQ24 234 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 ROGDIQ9GZN7 287 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 UBAP1Q9NZ09 502 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 FBXW2Q9UKT8 454 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 BAG5Q9UL15 447 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 PADI4Q9UM07 663 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 ATG4BQ9Y4P1 393 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 B4DGG1 531 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 CTSVO60911 334 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 BTN3A2P78410 334 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 TXNL4AP83876 142 aaKnown RBP16.39■□□□□ 0.21
PHGDH-208ENST00000641023 MERTKQ12866 999 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 SCARB2Q14108 478 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 SPIDRQ14159 915 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 MYBPC3Q14896 1274 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 SUZ12Q15022 739 aaKnown RBP16.39■□□□□ 0.21
PHGDH-208ENST00000641023 ZNF630Q2M218 657 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-208ENST00000641023 OTUD3Q5T2D3 398 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-208ENST00000641023 GPR153Q6NV75 609 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 GKN2Q86XP6 184 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 UBALD2Q8IYN6 164 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 SVOPLQ8N434 492 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 AVL9Q8NBF6 648 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 CAMKVQ8NCB2 501 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 NEURL3Q96EH8 262 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 EPS8L2Q9H6S3 715 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 LYARQ9NX58 379 aaKnown RBP16.39■□□□□ 0.21
PHGDH-208ENST00000641023 SMPD3Q9NY59 655 aaPredicted RBP16.39■□□□□ 0.21
PHGDH-208ENST00000641023 DOLKQ9UPQ8 538 aa16.39■□□□□ 0.21
PHGDH-208ENST00000641023 MDC1Q14676 2089 aaKnown RBP16.38■□□□□ 0.21
PHGDH-208ENST00000641023 A0A0J9YY10 115 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 A0A1W2PR48 441 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 SUV39H1O43463 412 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 NTSP30990 170 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 CXCL12P48061 93 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 BIRC2Q13490 618 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 SPDYE7PQ495Y7 208 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 ARMC6Q6NXE6 501 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 SLC36A4Q6YBV0 504 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 STK32CQ86UX6 486 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 CHERPQ8IWX8 916 aaKnown RBP16.38■□□□□ 0.21
PHGDH-208ENST00000641023 ZFP28Q8NHY6 868 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 PSMA8Q8TAA3 256 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 BAHD1Q8TBE0 780 aaPredicted RBP16.38■□□□□ 0.21
PHGDH-208ENST00000641023 RERGQ96A58 199 aaPredicted RBP16.38■□□□□ 0.21
PHGDH-208ENST00000641023 ADI1Q9BV57 179 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 ANKRD60Q9BZ19 345 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 PILRAQ9UKJ1 303 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 GON4LQ3T8J9 2241 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 OR5K3A6NET4 321 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 DLGAP1O14490 977 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 NOBOXO60393 691 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 FABP3P05413 133 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 AQP1P29972 269 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 ALDH3A2P51648 485 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 ARSFP54793 590 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 CDK6Q00534 326 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 SAXO2Q658L1 398 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 GALNT10Q86SR1 603 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 SLC30A8Q8IWU4 369 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 ZNF655Q8N720 491 aaPredicted RBP16.38■□□□□ 0.21
PHGDH-208ENST00000641023 UTP15Q8TED0 518 aaKnown RBP16.38■□□□□ 0.21
PHGDH-208ENST00000641023 UCN3Q969E3 161 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 HSH2DQ96JZ2 352 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 HSPA12BQ96MM6 686 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 BBS4Q96RK4 519 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 TM9SF3Q9HD45 589 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 PDP2Q9P2J9 529 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 SIT1Q9Y3P8 196 aa16.38■□□□□ 0.21
PHGDH-208ENST00000641023 GLOD5A6NK44 160 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 PROM1O43490 865 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 E2F6O75461 281 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 ERAL1O75616 437 aaKnown RBP16.37■□□□□ 0.21
PHGDH-208ENST00000641023 AIFM1O95831 613 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 ZNF888P0CJ79 500 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-208ENST00000641023 ZNF10P21506 573 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-208ENST00000641023 GPC1P35052 558 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 CLCN2P51788 898 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 DSTNP60981 165 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 ELOAQ14241 798 aaKnown RBP16.37■□□□□ 0.21
PHGDH-208ENST00000641023 KRT80Q6KB66 452 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 SLC48A1Q6P1K1 146 aa16.37■□□□□ 0.21
PHGDH-208ENST00000641023 KLHL35Q6PF15 583 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms