RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 FCRLBQ6BAA4 426 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 TMEM132CQ8N3T6 1108 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 AMER2Q8N7J2 671 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 TMEM178AQ8NBL3 297 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 PRR7Q8TB68 274 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 WDR20Q8TBZ3 569 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 SSC4DQ8WTU2 575 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 DAZLQ92904 295 aaKnown RBP16.54■□□□□ 0.24
PTPN11-207ENST00000639857 PHF21BQ96EK2 531 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 SCMH1Q96GD3 660 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 TAAR6Q96RI8 345 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 MAPKAP1Q9BPZ7 522 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 OR51B5Q9H339 312 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 NOL11Q9H8H0 719 aaKnown RBP16.54■□□□□ 0.24
PTPN11-207ENST00000639857 PPCSQ9HAB8 311 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 PSMC3IPQ9P2W1 217 aaPredicted RBP16.54■□□□□ 0.24
PTPN11-207ENST00000639857 VTI1BQ9UEU0 232 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 HECTD1Q9ULT8 2610 aa16.54■□□□□ 0.24
PTPN11-207ENST00000639857 TGFBR3LH3BV60 316 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 PLPP1O14494 284 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 OR7A17O14581 309 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 F10P00742 488 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 RPS17P08708 135 aaKnown RBP16.53■□□□□ 0.24
PTPN11-207ENST00000639857 FAM153BP0C7A2 387 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 CD46P15529 392 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 TNFRSF8P28908 595 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 PPP2R1BP30154 601 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 TRHRP34981 398 aaPredicted RBP16.53■□□□□ 0.24
PTPN11-207ENST00000639857 CD96P40200 585 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 CCNG1P51959 295 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 MLF1P58340 268 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 STX4Q12846 297 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 SLC29A2Q14542 456 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 OR1C1Q15619 314 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 FAM153CQ494X1 144 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 TMEM151AQ8N4L1 468 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 KIF2BQ8N4N8 673 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 MORN4Q8NDC4 146 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 OR14A16Q8NHC5 309 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 ATP6V1E2Q96A05 226 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 C5orf34Q96MH7 638 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 PSMG3-AS1Q96PY0 264 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 MTERF1Q99551 399 aaKnown RBP16.53■□□□□ 0.24
PTPN11-207ENST00000639857 CCDC77Q9BR77 488 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 DEFB126Q9BYW3 111 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 CDCP1Q9H5V8 836 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 PNO1Q9NRX1 252 aaKnown RBP16.53■□□□□ 0.24
PTPN11-207ENST00000639857 RNF11Q9Y3C5 154 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 CLCA3PQ9Y6N3 262 aa16.53■□□□□ 0.24
PTPN11-207ENST00000639857 SPTBN1Q01082 2364 aaKnown RBP16.53■□□□□ 0.24
PTPN11-207ENST00000639857 USP9YO00507 2555 aaPredicted RBP16.52■□□□□ 0.24
PTPN11-207ENST00000639857 TRBV11-1A0A0K0K1C0 115 aa16.52■□□□□ 0.24
PTPN11-207ENST00000639857 RTCAO00442 366 aaKnown RBP16.52■□□□□ 0.24
PTPN11-207ENST00000639857 OTCP00480 354 aa16.52■□□□□ 0.24
PTPN11-207ENST00000639857 CPN2P22792 545 aa16.52■□□□□ 0.24
PTPN11-207ENST00000639857 TPP2P29144 1249 aaPredicted RBP16.52■□□□□ 0.24
PTPN11-207ENST00000639857 TLX1P31314 330 aaPredicted RBP16.52■□□□□ 0.24
PTPN11-207ENST00000639857 CYB561P49447 251 aa16.52■□□□□ 0.24
PTPN11-207ENST00000639857 GPR143P51810 404 aa16.52■□□□□ 0.24
PTPN11-207ENST00000639857 TDGF1P3P51864 188 aa16.52■□□□□ 0.24
PTPN11-207ENST00000639857 RPS13P62277 151 aaKnown RBP16.52■□□□□ 0.24
PTPN11-207ENST00000639857 IGLV3-21P80748 117 aaPredicted RBP16.52■□□□□ 0.24
PTPN11-207ENST00000639857 TNFRSF17Q02223 184 aa16.52■□□□□ 0.24
PTPN11-207ENST00000639857 TRAF3Q13114 568 aa16.52■□□□□ 0.24
PTPN11-207ENST00000639857 ZRSR2Q15696 482 aaKnown RBP16.52■□□□□ 0.24
PTPN11-207ENST00000639857 FRG2Q64ET8 278 aa16.52■□□□□ 0.24
PTPN11-207ENST00000639857 MYRIPQ8NFW9 859 aa16.52■□□□□ 0.24
PTPN11-207ENST00000639857 OR52B6Q8NGF0 335 aa16.52■□□□□ 0.24
PTPN11-207ENST00000639857 SIGLEC12Q96PQ1 595 aa16.52■□□□□ 0.24
PTPN11-207ENST00000639857 FRG2BQ96QU4 278 aa16.52■□□□□ 0.24
PTPN11-207ENST00000639857 SERPINI1Q99574 410 aa16.52■□□□□ 0.24
PTPN11-207ENST00000639857 ALOXE3Q9BYJ1 711 aa16.52■□□□□ 0.24
PTPN11-207ENST00000639857 EPB41L4BQ9H329 900 aa16.52■□□□□ 0.24
PTPN11-207ENST00000639857 DDX31Q9H8H2 851 aaKnown RBP16.52■□□□□ 0.24
PTPN11-207ENST00000639857 ZBTB26Q9HCK0 441 aa16.52■□□□□ 0.24
PTPN11-207ENST00000639857 LYARQ9NX58 379 aaKnown RBP16.52■□□□□ 0.24
PTPN11-207ENST00000639857 LRFN1Q9P244 771 aa16.52■□□□□ 0.24
PTPN11-207ENST00000639857 SLC5A6Q9Y289 635 aa16.52■□□□□ 0.24
PTPN11-207ENST00000639857 SPTAN1Q13813 2472 aaKnown RBP16.52■□□□□ 0.23
PTPN11-207ENST00000639857 A8MT66 165 aa16.51■□□□□ 0.23
PTPN11-207ENST00000639857 A8MUA0 341 aa16.51■□□□□ 0.23
PTPN11-207ENST00000639857 MAN1A2O60476 641 aa16.51■□□□□ 0.23
PTPN11-207ENST00000639857 SEMA7AO75326 666 aa16.51■□□□□ 0.23
PTPN11-207ENST00000639857 NEURL1O76050 574 aa16.51■□□□□ 0.23
PTPN11-207ENST00000639857 MLYCDO95822 493 aa16.51■□□□□ 0.23
PTPN11-207ENST00000639857 IFNA16P05015 189 aa16.51■□□□□ 0.23
PTPN11-207ENST00000639857 GSTA1P08263 222 aa16.51■□□□□ 0.23
PTPN11-207ENST00000639857 SBK3P0C264 359 aa16.51■□□□□ 0.23
PTPN11-207ENST00000639857 TAC1P20366 129 aa16.51■□□□□ 0.23
PTPN11-207ENST00000639857 ARL1P40616 181 aaPredicted RBP16.51■□□□□ 0.23
PTPN11-207ENST00000639857 BUD31P41223 144 aaPredicted RBP16.51■□□□□ 0.23
PTPN11-207ENST00000639857 HLCSP50747 726 aa16.51■□□□□ 0.23
PTPN11-207ENST00000639857 HERVK_113P63132 956 aa16.51■□□□□ 0.23
PTPN11-207ENST00000639857 OC90Q02509 493 aaPredicted RBP16.51■□□□□ 0.23
PTPN11-207ENST00000639857 SLAMF1Q13291 335 aa16.51■□□□□ 0.23
PTPN11-207ENST00000639857 CLNKQ7Z7G1 428 aa16.51■□□□□ 0.23
PTPN11-207ENST00000639857 GPR180Q86V85 440 aa16.51■□□□□ 0.23
PTPN11-207ENST00000639857 NUDT13Q86X67 352 aa16.51■□□□□ 0.23
PTPN11-207ENST00000639857 FAM98AQ8NCA5 519 aaKnown RBP16.51■□□□□ 0.23
PTPN11-207ENST00000639857 OR8K3Q8NH51 312 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms