RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 MYOCOSA0A1B0GUC4 107 aa17.15■□□□□ 0.34
CLN6-220ENST00000637450 TCRBV9S1A1TA0A576 114 aa17.15■□□□□ 0.34
CLN6-220ENST00000637450 FAM159BA6NKW6 160 aa17.15■□□□□ 0.34
CLN6-220ENST00000637450 EIF3HO15372 352 aaKnown RBP eCLIP17.15■□□□□ 0.34
CLN6-220ENST00000637450 OR6B1O95007 311 aa17.15■□□□□ 0.34
CLN6-220ENST00000637450 EPORP19235 508 aa17.15■□□□□ 0.34
CLN6-220ENST00000637450 CASP2P42575 452 aa17.15■□□□□ 0.34
CLN6-220ENST00000637450 STX4Q12846 297 aa17.15■□□□□ 0.34
CLN6-220ENST00000637450 CHIT1Q13231 466 aa17.15■□□□□ 0.34
CLN6-220ENST00000637450 E2F2Q14209 437 aa17.15■□□□□ 0.34
CLN6-220ENST00000637450 ARHGAP11AQ6P4F7 1023 aa17.15■□□□□ 0.34
CLN6-220ENST00000637450 IL20RBQ6UXL0 311 aa17.15■□□□□ 0.34
CLN6-220ENST00000637450 HSDL2Q6YN16 418 aa17.15■□□□□ 0.34
CLN6-220ENST00000637450 C3orf62Q6ZUJ4 267 aa17.15■□□□□ 0.34
CLN6-220ENST00000637450 MARVELD2Q8N4S9 558 aa17.15■□□□□ 0.34
CLN6-220ENST00000637450 ASB15Q8WXK1 588 aa17.15■□□□□ 0.34
CLN6-220ENST00000637450 KCNC2Q96PR1 638 aa17.15■□□□□ 0.34
CLN6-220ENST00000637450 ERP44Q9BS26 406 aa17.15■□□□□ 0.34
CLN6-220ENST00000637450 ROGDIQ9GZN7 287 aa17.15■□□□□ 0.34
CLN6-220ENST00000637450 COQ3Q9NZJ6 369 aa17.15■□□□□ 0.34
CLN6-220ENST00000637450 CCDC168Q8NDH2 2452 aa17.14■□□□□ 0.34
CLN6-220ENST00000637450 FAM187AA6NFU0 413 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 WWP2O00308 870 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 FANCGO15287 622 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 CCNT2O60583 730 aaKnown RBP17.14■□□□□ 0.33
CLN6-220ENST00000637450 PDE9AO76083 593 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 C1QAP02745 245 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 GP5P40197 560 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 RAB10P61026 200 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 IRF8Q02556 426 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 CALCOCO2Q13137 446 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 PAGE2BQ5JRK9 111 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 TMEM211Q6ICI0 200 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 ZNF793Q6ZN11 406 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 SRFBP1Q8NEF9 429 aaKnown RBP17.14■□□□□ 0.33
CLN6-220ENST00000637450 OR8K3Q8NH51 312 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 OR14A16Q8NHC5 309 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 ZNF473Q8WTR7 871 aaKnown RBP17.14■□□□□ 0.33
CLN6-220ENST00000637450 C14orf79Q96F83 325 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 RASL10BQ96S79 203 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 MAPKAP1Q9BPZ7 522 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 TREX2Q9BQ50 279 aaPredicted RBP17.14■□□□□ 0.33
CLN6-220ENST00000637450 TBCDQ9BTW9 1192 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 CD244Q9BZW8 370 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 DEFB127Q9H1M4 99 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 DPH5Q9H2P9 285 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 RNF112Q9ULX5 631 aa17.14■□□□□ 0.33
CLN6-220ENST00000637450 CACNA1CQ13936 2221 aa17.13■□□□□ 0.33
CLN6-220ENST00000637450 PINLYPA6NC86 204 aa17.13■□□□□ 0.33
CLN6-220ENST00000637450 S100BP04271 92 aaPredicted RBP17.13■□□□□ 0.33
CLN6-220ENST00000637450 ATP5A1P25705 553 aaKnown RBP17.13■□□□□ 0.33
CLN6-220ENST00000637450 SPRP35270 261 aaPredicted RBP17.13■□□□□ 0.33
CLN6-220ENST00000637450 SOX3P41225 446 aa17.13■□□□□ 0.33
CLN6-220ENST00000637450 MSH2P43246 934 aa17.13■□□□□ 0.33
CLN6-220ENST00000637450 NR0B1P51843 470 aaKnown RBP17.13■□□□□ 0.33
CLN6-220ENST00000637450 HK2P52789 917 aa17.13■□□□□ 0.33
CLN6-220ENST00000637450 GPX6P59796 221 aa17.13■□□□□ 0.33
CLN6-220ENST00000637450 PPIAP62937 165 aaKnown RBP17.13■□□□□ 0.33
CLN6-220ENST00000637450 SERTAD2Q14140 314 aa17.13■□□□□ 0.33
CLN6-220ENST00000637450 EMC4Q5J8M3 183 aa17.13■□□□□ 0.33
CLN6-220ENST00000637450 RGS9BPQ6ZS82 235 aa17.13■□□□□ 0.33
CLN6-220ENST00000637450 CEP128Q6ZU80 1094 aa17.13■□□□□ 0.33
CLN6-220ENST00000637450 ZNF321PQ8N8H1 164 aa17.13■□□□□ 0.33
CLN6-220ENST00000637450 ACOT4Q8N9L9 421 aa17.13■□□□□ 0.33
CLN6-220ENST00000637450 OR2M7Q8NG81 312 aa17.13■□□□□ 0.33
CLN6-220ENST00000637450 STAG3L4Q8TBR4 150 aa17.13■□□□□ 0.33
CLN6-220ENST00000637450 MS4A8Q9BY19 250 aa17.13■□□□□ 0.33
CLN6-220ENST00000637450 OR8D2Q9GZM6 311 aa17.13■□□□□ 0.33
CLN6-220ENST00000637450 TP63Q9H3D4 680 aaPredicted RBP17.13■□□□□ 0.33
CLN6-220ENST00000637450 GRHL1Q9NZI5 618 aa17.13■□□□□ 0.33
CLN6-220ENST00000637450 C17orf105B2RV13 164 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 LDB3O75112 727 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 SCELO95171 688 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 GSTA2P09210 222 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 TNNI3P19429 210 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 KRTAP10-9P60411 292 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 RNF4P78317 190 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 PCDH1Q08174 1060 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 ZNF750Q32MQ0 723 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 TMEM35AQ53FP2 167 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 GRTP1Q5TC63 336 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 PAOXQ6QHF9 649 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 LRRC70Q7Z2Q7 622 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 MAATS1Q7Z4T9 603 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 ISCA2Q86U28 154 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 LAS2Q8IYD9 372 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 ASB5Q8WWX0 329 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 SREK1Q8WXA9 508 aaKnown RBP17.12■□□□□ 0.33
CLN6-220ENST00000637450 UBE2E3Q969T4 207 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 ANKRD9Q96BM1 317 aaPredicted RBP17.12■□□□□ 0.33
CLN6-220ENST00000637450 ALG9Q9H6U8 611 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 ZDHHC11Q9H8X9 412 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 CELSR1Q9NYQ6 3014 aa17.12■□□□□ 0.33
CLN6-220ENST00000637450 FAM166BA8MTA8 275 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 RTCAO00442 366 aaKnown RBP17.11■□□□□ 0.33
CLN6-220ENST00000637450 RAD51CO43502 376 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 GLSO94925 669 aaPredicted RBP17.11■□□□□ 0.33
CLN6-220ENST00000637450 CAPN3P20807 821 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 CNR1P21554 472 aa17.11■□□□□ 0.33
CLN6-220ENST00000637450 HIST1H1TP22492 207 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms