RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 AENQ8WTP8 325 aaKnown RBP5.35□□□□□ -1.55
SCN1A-209ENST00000635750 TMEM80Q96HE8 168 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 SCLYQ96I15 445 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 HBEGFQ99075 208 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 GPR174Q9BXC1 333 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 WDR55Q9H6Y2 383 aaPredicted RBP5.35□□□□□ -1.55
SCN1A-209ENST00000635750 ZBTB26Q9HCK0 441 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 ZFP57Q9NU63 452 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 ARHGAP23Q9P227 1491 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 NRP1O14786 923 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 PHYHO14832 338 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 SLC22A2O15244 555 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 TPPPO94811 219 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 CH25HO95992 272 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 PLATP00750 562 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 C6P13671 934 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 RPS3P23396 243 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCN1A-209ENST00000635750 POU4F2Q12837 409 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 KCNC3Q14003 757 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 FBXO48Q5FWF7 155 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 OGFOD2Q6N063 350 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 HAGHLQ6PII5 290 aaPredicted RBP5.35□□□□□ -1.55
SCN1A-209ENST00000635750 ABHD15Q6UXT9 468 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 UBE2Q1Q7Z7E8 422 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 SLC51AQ86UW1 340 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 SLC43A2Q8N370 569 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 PHTF2Q8N3S3 785 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 OR56A3Q8NH54 315 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 DIO2Q92813 273 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 TAAR8Q969N4 342 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 MUCL1Q96DR8 90 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 PURBQ96QR8 312 aaKnown RBP5.35□□□□□ -1.55
SCN1A-209ENST00000635750 ZDHHC9Q9Y397 364 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 CMAHPQ9Y471 501 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 MYH1P12882 1939 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 MYH4Q9Y623 1939 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 ABCA9Q8IUA7 1624 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 NRXN1Q9ULB1 1477 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 A0A1W2PPH5 198 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 OR6C70A6NIJ9 312 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 HAS3O00219 553 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 ABLIM1O14639 778 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 LSM1O15116 133 aaKnown RBP5.35□□□□□ -1.55
SCN1A-209ENST00000635750 CD36P16671 472 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 PRKCAP17252 672 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 MAGEA6P43360 314 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 BDKRB1P46663 353 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF136P52737 540 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 MTPNP58546 118 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 RPS15AP62244 130 aaKnown RBP5.35□□□□□ -1.55
SCN1A-209ENST00000635750 ACTA2P62736 377 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 ACTG2P63267 376 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 DDR1Q08345 913 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 CRELD2Q6UXH1 353 aaPredicted RBP5.35□□□□□ -1.55
SCN1A-209ENST00000635750 TTLL10Q6ZVT0 673 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 OR2M4Q96R27 311 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 LMF2Q9BU23 707 aaKnown RBP5.35□□□□□ -1.55
SCN1A-209ENST00000635750 EIF2B3Q9NR50 452 aaKnown RBP5.35□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF355PQ9NSJ1 428 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 ASTN1O14525 1302 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 E9PCH4 1651 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 ADAMTS13Q76LX8 1427 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 OR6C74A6NCV1 312 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 LRRN3E7EW58 273 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 PLSCR1O15162 318 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 FLRT2O43155 660 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 SEC14L5O43304 696 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 IGHEP01854 428 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 NELFEP18615 380 aaKnown RBP5.35□□□□□ -1.55
SCN1A-209ENST00000635750 ACTC1P68032 377 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 ACTA1P68133 377 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 GBE1Q04446 702 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 PPA1Q15181 289 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 CHRNA6Q15825 494 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 COL28A1Q2UY09 1125 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 PIGGQ5H8A4 983 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 KCNIP4Q6PIL6 250 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 MRPL21Q7Z2W9 205 aaKnown RBP5.35□□□□□ -1.55
SCN1A-209ENST00000635750 CBR4Q8N4T8 237 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 OR2AP1Q8NGE2 309 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 TSPEARQ8WU66 669 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 KLRG1Q96E93 195 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 DCBLD2Q96PD2 775 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 TOR3AQ9H497 397 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 EBF3Q9H4W6 596 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 IL21RQ9HBE5 538 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 LRFN1Q9P244 771 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 TMEM98Q9Y2Y6 226 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 PTPRMP28827 1452 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 MYH14Q7Z406 1995 aaKnown RBP5.35□□□□□ -1.55
SCN1A-209ENST00000635750 LOC105369274A0A096LPK9 316 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 ANKRD30BLA7E2S9 258 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF780AO75290 641 aaPredicted RBP5.35□□□□□ -1.55
SCN1A-209ENST00000635750 IFI30P13284 250 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 HTD2P86397 168 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 STK11Q15831 433 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 EXOSC6Q5RKV6 272 aaKnown RBP5.35□□□□□ -1.55
SCN1A-209ENST00000635750 C6orf183Q5T699 404 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 FSTL4Q6MZW2 842 aa5.35□□□□□ -1.55
SCN1A-209ENST00000635750 LRFN4Q6PJG9 635 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms