RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 DOHHQ9BU89 302 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 GPR174Q9BXC1 333 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 FXYD6Q9H0Q3 95 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 SLCO3A1Q9UIG8 710 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 C14orf166Q9Y224 244 aaKnown RBP12.3□□□□□ -0.44
SCN8A-209ENST00000627620 PCDHB3Q9Y5E6 796 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 KCPQ6ZWJ8 1503 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 IGLON5A6NGN9 336 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 OR5K4A6NMS3 321 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 J3QRK9 145 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 SMAD9O15198 467 aaKnown RBP12.3□□□□□ -0.44
SCN8A-209ENST00000627620 CSTAP01040 98 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 JUPP14923 745 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 GNG2P59768 71 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 ABRAXAS2Q15018 415 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 RTP2Q5QGT7 225 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 MAMDC4Q6UXC1 1216 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 KIAA1143Q96AT1 154 aaPredicted RBP12.3□□□□□ -0.44
SCN8A-209ENST00000627620 C12orf43Q96C57 262 aaKnown RBP12.3□□□□□ -0.44
SCN8A-209ENST00000627620 FBXL8Q96CD0 374 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 FAM210AQ96ND0 272 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 GPR34Q9UPC5 381 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 CDH10Q9Y6N8 788 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 TEX13DA0A0J9YY54 714 aaPredicted RBP12.3□□□□□ -0.44
SCN8A-209ENST00000627620 K7ERQ8 282 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 EMC8O43402 210 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 SPARCP09486 303 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 HSD3B1P14060 373 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 HSD3B2P26439 372 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 GRIA2P42262 883 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 SLC9A3P48764 834 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 DHCR24Q15392 516 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 VMACQ2NL98 169 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 ZNF517Q6ZMY9 492 aaPredicted RBP12.3□□□□□ -0.44
SCN8A-209ENST00000627620 SLC22A16Q86VW1 577 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 GID4Q8IVV7 300 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 THAP6Q8TBB0 222 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 DKK3Q9UBP4 350 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 TP53I11O14683 189 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 PLD2O14939 933 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 NUAK1O60285 661 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 PVALBP20472 110 aaPredicted RBP12.3□□□□□ -0.44
SCN8A-209ENST00000627620 FADDQ13158 208 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 TREML1Q86YW5 311 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 OR4C15Q8NGM1 316 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 OR8K3Q8NH51 312 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 SMARCD2Q92925 531 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 F2RL3Q96RI0 385 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 AIFM2Q9BRQ8 373 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 SMURF1Q9HCE7 757 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 ASB6Q9NWX5 421 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 VNN3Q9NY84 501 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 PLCL2Q9UPR0 1127 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 PTGDR2Q9Y5Y4 395 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 HSPA12AO43301 675 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 ELK4P28324 431 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 RPL19P84098 196 aaKnown RBP12.3□□□□□ -0.44
SCN8A-209ENST00000627620 CATSPEREQ5SY80 951 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 ZNF283Q8N7M2 679 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 TGM7Q96PF1 710 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 DPH7Q9BTV6 452 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 STRADBQ9C0K7 418 aa12.3□□□□□ -0.44
SCN8A-209ENST00000627620 C13orf42A0A1B0GVH6 325 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 C1orf226A1L170 272 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 E7ESA3 106 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 FAAHO00519 579 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 FLRT2O43155 660 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 SCO2O43819 266 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 GLDCP23378 1020 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 GLP1RP43220 463 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 PGGT1BP53609 377 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 ZNF689Q96CS4 500 aaPredicted RBP12.29□□□□□ -0.44
SCN8A-209ENST00000627620 MOCOSQ96EN8 888 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 HSPA12BQ96MM6 686 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 PIP5K1AQ99755 562 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 TAS2R10Q9NYW0 307 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 MKLN1Q9UL63 735 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 NOP16Q9Y3C1 178 aaKnown RBP12.29□□□□□ -0.44
SCN8A-209ENST00000627620 TEX13CA0A0J9YWL9 993 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 FEZF1A0PJY2 475 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 LSM1O15116 133 aaKnown RBP12.29□□□□□ -0.44
SCN8A-209ENST00000627620 EPCAMP16422 314 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 DUSP3P51452 185 aaPredicted RBP12.29□□□□□ -0.44
SCN8A-209ENST00000627620 DOC2AQ14183 400 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 EXOC3L2Q2M3D2 409 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 SLC27A4Q6P1M0 643 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 SYCE2Q6PIF2 218 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 TMEM135Q86UB9 458 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 APCDD1Q8J025 514 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 SLC44A3Q8N4M1 653 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 TMEM165Q9HC07 324 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 PDE7BQ9NP56 450 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 ENAMQ9NRM1 1142 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 SEC14L4Q9UDX3 406 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 ST3GAL4Q11206 333 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 SCAPQ12770 1279 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 NNATQ16517 81 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 TMEM107Q6UX40 140 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 SLC37A3Q8NCC5 494 aa12.29□□□□□ -0.44
SCN8A-209ENST00000627620 PSD4Q8NDX1 1056 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms