RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 ASB9Q96DX5 294 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 CGREF1Q99674 301 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 DCLRE1BQ9H816 532 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 RNPEPL1Q9HAU8 725 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 MYNNQ9NPC7 610 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 ANKMY1Q9P2S6 941 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 SUCOQ9UBS9 1254 aaKnown RBP9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 OR5K3A6NET4 321 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 CAPN5O15484 640 aaPredicted RBP9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 HCRTR1O43613 425 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 DNAJA2O60884 412 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 ERN1O75460 977 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 BCAS2O75934 225 aaPredicted RBP9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 PSMG1O95456 288 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 FURINP09958 794 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 HSD17B1P14061 328 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 PVRP15151 417 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 MTPNP58546 118 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 FLOT2Q14254 428 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 TRIM25Q14258 630 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 FXNQ16595 210 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 ISXQ2M1V0 245 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 DEFB133Q30KQ1 61 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 SPATS1Q496A3 300 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 TMEM35AQ53FP2 167 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 CCNYL2Q5T2Q4 361 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 CPTPQ5TA50 214 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 DNAJC14Q6Y2X3 702 aaPredicted RBP9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 R3HCC1LQ7Z5L2 792 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 NUDT13Q86X67 352 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 MFSD9Q8NBP5 474 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 VPS37AQ8NEZ2 397 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 ZUFSPQ96AP4 578 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 MS4A6EQ96DS6 147 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 ITCHQ96J02 903 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 ANKRD27Q96NW4 1050 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 OR2A5Q96R48 311 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 SCN2AQ99250 2005 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 SLC6A16Q9GZN6 736 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 KLHL25Q9H0H3 589 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 REEP4Q9H6H4 257 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 UCK1Q9HA47 277 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 FAM120CQ9NX05 1096 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 ATP6V1HQ9UI12 483 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 PCDHB14Q9Y5E9 798 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 PCDHGA8Q9Y5G5 932 aa9.02□□□□□ -0.97
PDLIM5-223ENST00000627587 SPTBP11277 2137 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 A0A0A6YYD5 115 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 A0A0G2JN53 185 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 A0A0J9YY10 115 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 H0Y3Z8 333 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 H3BNX3 289 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 P2RX6O15547 441 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 KLK10O43240 276 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 UBXN7O94888 489 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 ZIC2O95409 532 aaPredicted RBP9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 STAMBPO95630 424 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 TYRP1P17643 537 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 EFNA1P20827 205 aaPredicted RBP9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 GSK3BP49841 420 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 MAPK12P53778 367 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 TAS2R50P59544 299 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 FIGLAQ6QHK4 219 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 PCSK4Q6UW60 755 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 IKBIPQ70UQ0 350 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 ZNF551Q7Z340 670 aaPredicted RBP9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 CLECL1Q8IZS7 167 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 SRFBP1Q8NEF9 429 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 OR8J3Q8NGG0 315 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 IFI44Q8TCB0 444 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 UCN3Q969E3 161 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 TM4SF18Q96CE8 201 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 TM4SF19Q96DZ7 209 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 AURKBQ96GD4 344 aaPredicted RBP9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 DUSP26Q9BV47 211 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 TRIM4Q9C037 500 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 DDX31Q9H8H2 851 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 PRDM7Q9NQW5 492 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 ATAD3AQ9NVI7 634 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 SH3BP4Q9P0V3 963 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 ADAM29Q9UKF5 820 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 POMT2Q9UKY4 750 aa9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 WBP11Q9Y2W2 641 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-223ENST00000627587 A0A096LPI6 279 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 EME2A4GXA9 379 aaPredicted RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 LILRA5A6NI73 299 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 B8ZZF3 427 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 TMX2-CTNND1H3BSU7 103 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 RFXANKO14593 260 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 ERI3O43414 337 aaKnown RBP9□□□□□ -0.97
PDLIM5-223ENST00000627587 FKBP6O75344 327 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 ANP32DO95626 131 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 GSNP06396 782 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 IL3P08700 152 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 SLC35G6P0C7Q6 338 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 ATP6V1B2P21281 511 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 SSR2P43308 183 aa9□□□□□ -0.97
PDLIM5-223ENST00000627587 GSTM5P46439 218 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms