RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 HS6ST1O60243 411 aa20.95■□□□□ 0.94
PNKP-220ENST00000627232 HIST1H1TP22492 207 aaPredicted RBP20.95■□□□□ 0.94
PNKP-220ENST00000627232 STXBP1P61764 594 aaKnown RBP20.95■□□□□ 0.94
PNKP-220ENST00000627232 TDGQ13569 410 aa20.95■□□□□ 0.94
PNKP-220ENST00000627232 LRIT3Q3SXY7 679 aa20.95■□□□□ 0.94
PNKP-220ENST00000627232 PRRT3Q5FWE3 981 aa20.95■□□□□ 0.94
PNKP-220ENST00000627232 SYT13Q7L8C5 426 aa20.95■□□□□ 0.94
PNKP-220ENST00000627232 FLCNQ8NFG4 579 aa20.95■□□□□ 0.94
PNKP-220ENST00000627232 OR13H1Q8NG92 308 aa20.95■□□□□ 0.94
PNKP-220ENST00000627232 GPBAR1Q8TDU6 330 aa20.95■□□□□ 0.94
PNKP-220ENST00000627232 SIRT3Q9NTG7 399 aaPredicted RBP20.95■□□□□ 0.94
PNKP-220ENST00000627232 TMEFF2Q9UIK5 374 aaPredicted RBP20.95■□□□□ 0.94
PNKP-220ENST00000627232 ASB4Q9Y574 426 aa20.95■□□□□ 0.94
PNKP-220ENST00000627232 SNX8Q9Y5X2 465 aa20.95■□□□□ 0.94
PNKP-220ENST00000627232 ZW10O43264 779 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 SEC24DO94855 1032 aaPredicted RBP20.94■□□□□ 0.94
PNKP-220ENST00000627232 ATP5A1P25705 553 aaKnown RBP20.94■□□□□ 0.94
PNKP-220ENST00000627232 ALDH3B2P48448 385 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 PCBP3P57721 371 aaKnown RBP20.94■□□□□ 0.94
PNKP-220ENST00000627232 IL18R1Q13478 541 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 IFI44LQ53G44 452 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 NDUFAF5Q5TEU4 345 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 CHRDL2Q6WN34 429 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 Q6ZS52 159 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 ZC3H7AQ8IWR0 971 aaKnown RBP20.94■□□□□ 0.94
PNKP-220ENST00000627232 C8orf59Q8N0T1 100 aaPredicted RBP20.94■□□□□ 0.94
PNKP-220ENST00000627232 FLVCR1-AS1Q8TAF5 88 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 ADAMTS16Q8TE57 1224 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 DGCR14Q96DF8 476 aaKnown RBP20.94■□□□□ 0.94
PNKP-220ENST00000627232 MUS81Q96NY9 551 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 GSDMCQ9BYG8 508 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 REEP1Q9H902 201 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 A4GALTQ9NPC4 353 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 ANKMY1Q9P2S6 941 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 U3KQV3 271 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 A0A0G2JN53 185 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 MYO1GB0I1T2 1018 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 PPM1DO15297 605 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 TNFSF14O43557 240 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 ITGAMP11215 1152 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 CHRNB1P11230 501 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 HOXB3P14651 431 aaPredicted RBP20.94■□□□□ 0.94
PNKP-220ENST00000627232 PRKACGP22612 351 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 AQP1P29972 269 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 CASP9P55211 416 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 PPP1R8Q12972 351 aaKnown RBP20.94■□□□□ 0.94
PNKP-220ENST00000627232 SLAMF1Q13291 335 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 KCNAB2Q13303 367 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 CNPY1Q3B7I2 92 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 TJAP1Q5JTD0 557 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 THAP5Q7Z6K1 395 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 ACOT4Q8N9L9 421 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 FAM174AQ8TBP5 190 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 NT5CQ8TCD5 201 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 TAMM41Q96BW9 452 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 TOE1Q96GM8 510 aaKnown RBP20.94■□□□□ 0.94
PNKP-220ENST00000627232 TSC22D3Q99576 134 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 EPYCQ99645 322 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 AMBRA1Q9C0C7 1298 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 SLC35C2Q9NQQ7 365 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 GPR27Q9NS67 375 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 WSB2Q9NYS7 404 aaPredicted RBP20.94■□□□□ 0.94
PNKP-220ENST00000627232 APOBEC3BQ9UH17 382 aaKnown RBP20.94■□□□□ 0.94
PNKP-220ENST00000627232 CYP8B1Q9UNU6 501 aa20.94■□□□□ 0.94
PNKP-220ENST00000627232 RANBP2P49792 3224 aaKnown RBP20.93■□□□□ 0.94
PNKP-220ENST00000627232 OR2A25A4D2G3 310 aa20.93■□□□□ 0.94
PNKP-220ENST00000627232 FAM221BA6H8Z2 402 aa20.93■□□□□ 0.94
PNKP-220ENST00000627232 OR5K4A6NMS3 321 aa20.93■□□□□ 0.94
PNKP-220ENST00000627232 C4orf51C9J302 202 aa20.93■□□□□ 0.94
PNKP-220ENST00000627232 SLC16A6O15403 523 aa20.93■□□□□ 0.94
PNKP-220ENST00000627232 PAX7P23759 505 aa20.93■□□□□ 0.94
PNKP-220ENST00000627232 MAGEA8P43361 318 aa20.93■□□□□ 0.94
PNKP-220ENST00000627232 RPS6KA3P51812 740 aa20.93■□□□□ 0.94
PNKP-220ENST00000627232 CEP68Q76N32 757 aa20.93■□□□□ 0.94
PNKP-220ENST00000627232 C6orf120Q7Z4R8 191 aa20.93■□□□□ 0.94
PNKP-220ENST00000627232 TRIM48Q8IWZ4 208 aa20.93■□□□□ 0.94
PNKP-220ENST00000627232 SLC22A18ASQ8N1D0 253 aa20.93■□□□□ 0.94
PNKP-220ENST00000627232 OR2A14Q96R47 310 aa20.93■□□□□ 0.94
PNKP-220ENST00000627232 ZNF347Q96SE7 839 aa20.93■□□□□ 0.94
PNKP-220ENST00000627232 GAS2L1Q99501 681 aaPredicted RBP20.93■□□□□ 0.94
PNKP-220ENST00000627232 THSD1Q9NS62 852 aa20.93■□□□□ 0.94
PNKP-220ENST00000627232 LYARQ9NX58 379 aaKnown RBP20.93■□□□□ 0.94
PNKP-220ENST00000627232 THUMPD1Q9NXG2 353 aaKnown RBP20.93■□□□□ 0.94
PNKP-220ENST00000627232 C5AR2Q9P296 337 aa20.93■□□□□ 0.94
PNKP-220ENST00000627232 SAMHD1Q9Y3Z3 626 aaKnown RBP20.93■□□□□ 0.94
PNKP-220ENST00000627232 PCDHGB3Q9Y5G1 929 aa20.93■□□□□ 0.94
PNKP-220ENST00000627232 M0QX08 132 aa20.92■□□□□ 0.94
PNKP-220ENST00000627232 C9P02748 559 aa20.92■□□□□ 0.94
PNKP-220ENST00000627232 NTSP30990 170 aa20.92■□□□□ 0.94
PNKP-220ENST00000627232 RGS1Q08116 209 aa20.92■□□□□ 0.94
PNKP-220ENST00000627232 HSPB3Q12988 150 aa20.92■□□□□ 0.94
PNKP-220ENST00000627232 PLCL1Q15111 1095 aa20.92■□□□□ 0.94
PNKP-220ENST00000627232 TCEA2Q15560 299 aa20.92■□□□□ 0.94
PNKP-220ENST00000627232 SPDYE7PQ495Y7 208 aa20.92■□□□□ 0.94
PNKP-220ENST00000627232 KDM4DQ6B0I6 523 aa20.92■□□□□ 0.94
PNKP-220ENST00000627232 REEP3Q6NUK4 255 aa20.92■□□□□ 0.94
PNKP-220ENST00000627232 CEACAM20Q6UY09 585 aa20.92■□□□□ 0.94
PNKP-220ENST00000627232 OR8K5Q8NH50 307 aa20.92■□□□□ 0.94
PNKP-220ENST00000627232 NCSTNQ92542 709 aa20.92■□□□□ 0.94
PNKP-220ENST00000627232 GAL3ST3Q96A11 431 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms