RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.44□□□□□ -1.86
CDR1-202ENST00000625883 A0A0U1RQG5 324 aaPredicted RBP3.44□□□□□ -1.86
CDR1-202ENST00000625883 SH3PXD2BA1X283 911 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 MACROD2A1Z1Q3 448 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 CCDC69A6NI79 296 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 OGTO15294 1046 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 TNFSF12O43508 249 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 SOCS5O75159 536 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 SLC4A1P02730 911 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 ALPPP05187 535 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 GSTA2P09210 222 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 ALPPL2P10696 532 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 PITPNBP48739 271 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 FHITP49789 147 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 SRP54P61011 504 aaKnown RBP3.44□□□□□ -1.86
CDR1-202ENST00000625883 HERV-K104P63124 156 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 CALCOCO2Q13137 446 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 ZNF177Q13360 481 aaPredicted RBP3.44□□□□□ -1.86
CDR1-202ENST00000625883 OR1C1Q15619 314 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 PARP10Q53GL7 1025 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 GFI1BQ5VTD9 330 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 ADAM5Q6NVV9 412 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 NEPROQ6NW34 567 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 ADAMTSL2Q86TH1 951 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 OR4N5Q8IXE1 308 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 WDSUB1Q8N9V3 476 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 AQP11Q8NBQ7 271 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 TMEM185AQ8NFB2 350 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 KIAA1524Q8TCG1 905 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 LIPHQ8WWY8 451 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 C11orf52Q96A22 123 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 ATXN7L3BQ96GX2 97 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 PCED1BQ96HM7 432 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 CXorf58Q96LI9 332 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 OPRPNQ99935 248 aaPredicted RBP3.44□□□□□ -1.86
CDR1-202ENST00000625883 PINK1Q9BXM7 581 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 WWP1Q9H0M0 922 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 ABCG8Q9H221 673 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 CXXC4Q9H2H0 198 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 MARCH7Q9H992 704 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 SYTL2Q9HCH5 934 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 IL1RAPQ9NPH3 570 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 ACOXLQ9NUZ1 547 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 BAIAP2L1Q9UHR4 511 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 TEKT2Q9UIF3 430 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 TSPAN16Q9UKR8 245 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 STRAPQ9Y3F4 350 aaKnown RBP3.44□□□□□ -1.86
CDR1-202ENST00000625883 ZHX2Q9Y6X8 837 aa3.44□□□□□ -1.86
CDR1-202ENST00000625883 IGLV7-46A0A075B6I9 117 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 LOC105371242A0A075B767 164 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 IGHV3-38A0A0C4DH36 116 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 CCSO14618 274 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 LRP3O75074 770 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 ATP6V1G1O75348 118 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 SEC22BO75396 215 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 CSDE1O75534 798 aaKnown RBP3.43□□□□□ -1.86
CDR1-202ENST00000625883 MTRF1O75570 445 aaKnown RBP3.43□□□□□ -1.86
CDR1-202ENST00000625883 TXNDC12O95881 172 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 AOC1P19801 751 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 FCARP24071 287 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 NSFP46459 744 aaKnown RBP3.43□□□□□ -1.86
CDR1-202ENST00000625883 LUMP51884 338 aaPredicted RBP3.43□□□□□ -1.86
CDR1-202ENST00000625883 HNRNPFP52597 415 aaKnown RBP3.43□□□□□ -1.86
CDR1-202ENST00000625883 NDST2P52849 883 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 HSPA14Q0VDF9 509 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 PDK1Q15118 436 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 NECTIN1Q15223 517 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 MTHFSDQ2M296 383 aaKnown RBP3.43□□□□□ -1.86
CDR1-202ENST00000625883 MOGAT2Q3SYC2 334 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 RFTN2Q52LD8 501 aaPredicted RBP3.43□□□□□ -1.86
CDR1-202ENST00000625883 ZC2HC1BQ5TFG8 222 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 CNSTQ6PJW8 725 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 LCLAT1Q6UWP7 414 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 GDPGP1Q6ZNW5 385 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 NR4A3Q92570 626 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 POM121L2Q96KW2 1035 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 GPR137Q96N19 417 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 PKP2Q99959 881 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 JPH2Q9BR39 696 aaPredicted RBP3.43□□□□□ -1.86
CDR1-202ENST00000625883 FGFBP2Q9BYJ0 223 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 TEX10Q9NXF1 929 aaPredicted RBP3.43□□□□□ -1.86
CDR1-202ENST00000625883 NDE1Q9NXR1 346 aa3.43□□□□□ -1.86
CDR1-202ENST00000625883 CSO75390 466 aaKnown RBP3.42□□□□□ -1.86
CDR1-202ENST00000625883 LYNP07948 512 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 TPBGLP0DKB5 382 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 STIP1P31948 543 aaKnown RBP3.42□□□□□ -1.86
CDR1-202ENST00000625883 TNFRSF4P43489 277 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 CLK1P49759 484 aaKnown RBP3.42□□□□□ -1.86
CDR1-202ENST00000625883 HILS1P60008 231 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 ABCE1P61221 599 aaKnown RBP3.42□□□□□ -1.86
CDR1-202ENST00000625883 PMP22Q01453 160 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 WASHC5Q12768 1159 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 PPP1R8Q12972 351 aaKnown RBP3.42□□□□□ -1.86
CDR1-202ENST00000625883 RIGQ13278 110 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 KIAA0141Q14154 515 aaPredicted RBP3.42□□□□□ -1.86
CDR1-202ENST00000625883 GCKRQ14397 625 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 MLF2Q15773 248 aaPredicted RBP3.42□□□□□ -1.86
CDR1-202ENST00000625883 TEX35Q5T0J7 233 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 NKAIN2Q5VXU1 208 aa3.42□□□□□ -1.86
CDR1-202ENST00000625883 ITIH5Q86UX2 942 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms