RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 DENND6BQ8NEG7 585 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 OR2L3Q8NG85 312 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 MRGPRX1Q96LB2 322 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 ZNF347Q96SE7 839 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 KRT84Q9NSB2 600 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 TAS2R7Q9NYW3 318 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 PIAS3Q9Y6X2 628 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 COLEC10Q9Y6Z7 277 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 HSPE1-MOB4S4R3N1 261 aa18.75■□□□□ 0.59
PCDHB11-202ENST00000624887 ADAMDEC1O15204 470 aa18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 AGXTP21549 392 aa18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 IGFBP4P22692 258 aa18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 PEBP1P30086 187 aaKnown RBP18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 SSR2P43308 183 aa18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 CLK3P49761 638 aaKnown RBP18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 IL1RL1Q01638 556 aa18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 GRSF1Q12849 480 aaKnown RBP eCLIP18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 CDK5R2Q13319 367 aa18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 NEDD8Q15843 81 aa18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 CEACAM20Q6UY09 585 aa18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 ZNF420Q8TAQ5 688 aaPredicted RBP18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 EXOSC8Q96B26 276 aaKnown RBP18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 ZBED6CLQ96FA7 236 aaPredicted RBP18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 PDXPQ96GD0 296 aa18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 CNDP2Q96KP4 475 aaKnown RBP18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 C17orf62Q9BQA9 187 aa18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 SARGQ9BW04 601 aa18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 TRPV5Q9NQA5 729 aa18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 THSD1Q9NS62 852 aa18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 SIRT3Q9NTG7 399 aaPredicted RBP18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 ACSS1Q9NUB1 689 aaPredicted RBP18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 C5AR2Q9P296 337 aa18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 DGKBQ9Y6T7 804 aa18.74■□□□□ 0.59
PCDHB11-202ENST00000624887 TMEM265A0A087WTH1 108 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 SLC1A7O00341 560 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 PPM1DO15297 605 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 CCDC159P0C7I6 412 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 ACADMP11310 421 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 AHRP35869 848 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 SIM2Q14190 667 aaPredicted RBP18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 NFATC4Q14934 902 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 ADPRMQ3LIE5 342 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 FBXL6Q8N531 539 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 TTC29Q8NA56 475 aaPredicted RBP18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 B4GALNT2Q8NHY0 566 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 OR1E3Q8WZA6 343 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 ZNF566Q969W8 418 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 SPHK1Q9NYA1 384 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 TBC1D29Q9UFV1 150 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 NDRG4Q9ULP0 352 aaKnown RBP18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 CDC14AQ9UNH5 594 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 LYVE1Q9Y5Y7 322 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 A0A0G2JN53 185 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 HAT1O14929 419 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 CYP4B1P13584 511 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 DRD2P14416 443 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 TNFRSF1BP20333 461 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 DCKP27707 260 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 IL5RAQ01344 420 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 SFSWAPQ12872 951 aaKnown RBP18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 HYAL2Q12891 473 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 MLC1Q15049 377 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 XAF1Q6GPH4 301 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 REEP3Q6NUK4 255 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 ENPP7Q6UWV6 458 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 WASH2PQ6VEQ5 465 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 ZNF793Q6ZN11 406 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 ARMC8Q8IUR7 673 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 PSMA8Q8TAA3 256 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 ZNF300Q96RE9 604 aaPredicted RBP18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 DOK1Q99704 481 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 DPH7Q9BTV6 452 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 KLHL31Q9H511 634 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 A4GALTQ9NPC4 353 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 EHD3Q9NZN3 535 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 EBF1Q9UH73 591 aa18.73■□□□□ 0.59
PCDHB11-202ENST00000624887 PRAMEF25A6NGN4 478 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 TNFRSF11BO00300 401 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 ITGA2P17301 1181 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 OR1E2P47887 323 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 HSPB3Q12988 150 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 TRIM69Q86WT6 500 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 SPARTQ8N0X7 666 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 TBC1D19Q8N5T2 526 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 HORMAD2Q8N7B1 307 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 TMEM145Q8NBT3 493 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 OR13F1Q8NGS4 319 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 FAM81AQ8TBF8 368 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 GEMIN6Q8WXD5 167 aaKnown RBP18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 SGCDQ92629 289 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 MS4A6EQ96DS6 147 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 C8orf33Q9H7E9 229 aaPredicted RBP18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 FANCEQ9HB96 536 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 CD93Q9NPY3 652 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 EXD2Q9NVH0 621 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 TESMINQ9Y4I5 508 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 GMPPBQ9Y5P6 360 aa18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 SPTBN5Q9NRC6 3674 aaKnown RBP18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 SNRNP200O75643 2136 aaKnown RBP18.72■□□□□ 0.59
PCDHB11-202ENST00000624887 E9PQ18 207 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms