RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 CXorf57Q6NSI4 855 aaKnown RBP13.48□□□□□ -0.25
LDB3-209ENST00000623056 MZT2BQ6NZ67 158 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 BCDIN3DQ7Z5W3 292 aaKnown RBP13.48□□□□□ -0.25
LDB3-209ENST00000623056 DUSP18Q8NEJ0 188 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 OR4M2Q8NGB6 313 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 OR6K2Q8NGY2 324 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 ATG10Q9H0Y0 220 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 SPATA6Q9NWH7 488 aaPredicted RBP13.48□□□□□ -0.25
LDB3-209ENST00000623056 NLKQ9UBE8 527 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 ENPP4Q9Y6X5 453 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 CEP350Q5VT06 3117 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 WASHC1A8K0Z3 465 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 CDK2AP1O14519 115 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 SOX14O95416 240 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 ZDHHC11BP0C7U3 371 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 MYL12AP19105 171 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 POU3F3P20264 500 aaPredicted RBP13.48□□□□□ -0.25
LDB3-209ENST00000623056 HNMTP50135 292 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 CLDN20P56880 219 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 RRAS2P62070 204 aaPredicted RBP13.48□□□□□ -0.25
LDB3-209ENST00000623056 IRF8Q02556 426 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 MGAT3Q09327 533 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 MAB21L1Q13394 359 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 TMIGD1Q6UXZ0 262 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 IFNL1Q8IU54 200 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 TAGAPQ8N103 731 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 Q8N402 240 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 HJURPQ8NCD3 748 aaPredicted RBP13.48□□□□□ -0.25
LDB3-209ENST00000623056 WDR20Q8TBZ3 569 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 C11orf24Q96F05 449 aaPredicted RBP13.48□□□□□ -0.25
LDB3-209ENST00000623056 P2RY13Q9BPV8 354 aa13.48□□□□□ -0.25
LDB3-209ENST00000623056 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.48□□□□□ -0.25
LDB3-209ENST00000623056 RPL36Q9Y3U8 105 aaKnown RBP13.48□□□□□ -0.25
LDB3-209ENST00000623056 A0A1B0GVM2 712 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 FAM240BA0A1B0GVZ2 78 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 C2orf78A6NCI8 922 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 A8MX80 341 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 ANXA4P09525 319 aaPredicted RBP13.47□□□□□ -0.25
LDB3-209ENST00000623056 POLR2CP19387 275 aaPredicted RBP13.47□□□□□ -0.25
LDB3-209ENST00000623056 CTGFP29279 349 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 EVI2BP34910 448 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 ASMTP46597 345 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 MRPL58Q14197 206 aaKnown RBP13.47□□□□□ -0.25
LDB3-209ENST00000623056 CTXN3Q4LDR2 81 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 FLYWCH1Q4VC44 716 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 RNLSQ5VYX0 342 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 C17orf99Q6UX52 265 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 USP30Q70CQ3 517 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 CAMKMTQ7Z624 323 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 PDZD3Q86UT5 571 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 BHMTQ93088 406 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 MARVELD3Q96A59 401 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 OMA1Q96E52 524 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 KCTD7Q96MP8 289 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 SAMD11Q96NU1 681 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 QRFPRQ96P65 431 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 KATNB1Q9BVA0 655 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 TSSK6Q9BXA6 273 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 B3GAT2Q9NPZ5 323 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 REV1Q9UBZ9 1251 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 MALT1Q9UDY8 824 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 YARS2Q9Y2Z4 477 aaKnown RBP13.47□□□□□ -0.25
LDB3-209ENST00000623056 DNMT3AQ9Y6K1 912 aaPredicted RBP13.47□□□□□ -0.25
LDB3-209ENST00000623056 TRBC2A0A5B9 178 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 LYRM1O43325 122 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 ETHE1O95571 254 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 KLKB1P03952 638 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 C8GP07360 202 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 PRKAR1AP10644 381 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 OSMP13725 252 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 ARSBP15848 533 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 CPEP16870 476 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 RHCEP18577 417 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 NSG1P42857 185 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 HBA1P69905 142 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 CDK6Q00534 326 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 RBBP4Q09028 425 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 HSPA14Q0VDF9 509 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 CRHR2Q13324 411 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 NFE2L1Q14494 772 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 GPR33Q49SQ1 333 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 ZNF385BQ569K4 471 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 XKR6Q5GH73 641 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 C9orf62Q8N4C0 152 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 ASB11Q8WXH4 323 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 GFM1Q96RP9 751 aaKnown RBP13.47□□□□□ -0.25
LDB3-209ENST00000623056 SLC35A5Q9BS91 424 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 TM6SF2Q9BZW4 377 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 PPP1R3EQ9H7J1 279 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 GALNT9Q9HCQ5 603 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 ACSL6Q9UKU0 697 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 PRG3Q9Y2Y8 225 aaPredicted RBP13.47□□□□□ -0.25
LDB3-209ENST00000623056 SCN8AQ9UQD0 1980 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 TRPM7Q96QT4 1865 aa13.47□□□□□ -0.25
LDB3-209ENST00000623056 TRBV4-1A0A0J9YWV2 114 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 TEX51A0A1B0GUA7 166 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 MYADML2A6NDP7 307 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 RNASET2O00584 256 aaKnown RBP13.46□□□□□ -0.25
LDB3-209ENST00000623056 TSC22D2O75157 780 aa13.46□□□□□ -0.25
LDB3-209ENST00000623056 GJB5O95377 273 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms