RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 TAP2Q03519 686 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 GBX1Q14549 363 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 TLR1Q15399 786 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 FIGNL1Q6PIW4 674 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 PACS2Q86VP3 889 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 C7orf57Q8NEG2 295 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 OR2L5Q8NG80 312 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 OR6N1Q8NGY5 312 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 ASB11Q8WXH4 323 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 RHBDF1Q96CC6 855 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 THAP11Q96EK4 314 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 LOXL4Q96JB6 756 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 BMFQ96LC9 184 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 ZNF382Q96SR6 550 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 BDH2Q9BUT1 245 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 PELI2Q9HAT8 420 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 TREX1Q9NSU2 369 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 STMN3Q9NZ72 180 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 SCHIP1Q9P0W5 487 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-229ENST00000622668 SAMHD1Q9Y3Z3 626 aaKnown RBP8.66□□□□□ -1.02
HDAC9-229ENST00000622668 SPIN1Q9Y657 262 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-229ENST00000622668 PLXNA1Q9UIW2 1896 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 DOCK8Q8NF50 2099 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 GOLGB1Q14789 3259 aaKnown RBP8.66□□□□□ -1.02
HDAC9-229ENST00000622668 C2orf92A0A1B0GVN3 265 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 EDF1O60869 148 aaKnown RBP8.66□□□□□ -1.02
HDAC9-229ENST00000622668 DNAJC8O75937 253 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-229ENST00000622668 ZFAND5O76080 213 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 AHSA1O95433 338 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 TPOP07202 933 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 ADRA1AP35348 466 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 TMEM107Q6UX40 140 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 ISCA2Q86U28 154 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 MICU2Q8IYU8 434 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 OFCC1Q8IZS5 231 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 SIRT6Q8N6T7 355 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 ACOT4Q8N9L9 421 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 GPR150Q8NGU9 434 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 RP9Q8TA86 221 aaKnown RBP8.66□□□□□ -1.02
HDAC9-229ENST00000622668 GAL3ST3Q96A11 431 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 MRPL48Q96GC5 212 aaKnown RBP8.66□□□□□ -1.02
HDAC9-229ENST00000622668 TIMMDC1Q9NPL8 285 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 NECTIN3Q9NQS3 549 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 AGPAT4Q9NRZ5 378 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 GPRC5BQ9NZH0 403 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 FETUBQ9UGM5 382 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 ANAPC2Q9UJX6 822 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 TMED5Q9Y3A6 229 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 U3KQV3 271 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 CFAP73A6NFT4 308 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 G3V3Y1 287 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 IFNW1P05000 195 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 BCHEP06276 602 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 CAPZBP47756 277 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 EPS8Q12929 822 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 PTGR1Q14914 329 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 CLCA4Q14CN2 919 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 SPANXN4Q5MJ08 99 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 COMMD6Q7Z4G1 85 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 ZSWIM9Q86XI8 627 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 VRK3Q8IV63 474 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 SEC14L1Q92503 715 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 PTERQ96BW5 349 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 SERINC2Q96SA4 455 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 EPB41L4BQ9H329 900 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 EHD1Q9H4M9 534 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 REEP4Q9H6H4 257 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 ZNF395Q9H8N7 513 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-229ENST00000622668 SCN3BQ9NY72 215 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 P2RX2Q9UBL9 471 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 ADAMTS6Q9UKP5 1117 aa8.66□□□□□ -1.02
HDAC9-229ENST00000622668 ZNF638Q14966 1978 aaKnown RBP8.65□□□□□ -1.02
HDAC9-229ENST00000622668 CSTAP01040 98 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 PTGER1P34995 402 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 DSTNP60981 165 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 CXADRP78310 365 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 KLF10Q13118 480 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 TOP3AQ13472 1001 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-229ENST00000622668 EIF3MQ7L2H7 374 aaKnown RBP8.65□□□□□ -1.02
HDAC9-229ENST00000622668 VASH2Q86V25 355 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 RIBC2Q9H4K1 309 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 LGALS13Q9UHV8 139 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 FARSAQ9Y285 508 aaKnown RBP8.65□□□□□ -1.02
HDAC9-229ENST00000622668 PRSS51A0A1B0GVH4 220 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 A0A1B0GX78 115 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 TRBC2A0A5B9 178 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 E7ESA3 106 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 CLIC1O00299 241 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 NUDT21O43809 227 aaKnown RBP8.65□□□□□ -1.02
HDAC9-229ENST00000622668 RAD1O60671 282 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 STK17BO94768 372 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 MTPNP58546 118 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 RPS3AP61247 264 aaKnown RBP8.65□□□□□ -1.02
HDAC9-229ENST00000622668 PUM1Q14671 1186 aaKnown RBP eCLIP8.65□□□□□ -1.02
HDAC9-229ENST00000622668 CARTPTQ16568 116 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 ZBTB49Q6ZSB9 765 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 TECPR1Q7Z6L1 1165 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 ZDHHC13Q8IUH4 622 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 NUP43Q8NFH3 380 aa8.65□□□□□ -1.02
HDAC9-229ENST00000622668 OR52J3Q8NH60 311 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms