RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 GPR50Q13585 617 aa15.05■□□□□ 0
NPHP4-211ENST00000622020 KRR1Q13601 381 aaKnown RBP15.05■□□□□ 0
NPHP4-211ENST00000622020 TIMM50Q3ZCQ8 353 aa15.05■□□□□ 0
NPHP4-211ENST00000622020 MLIPQ5VWP3 458 aa15.05■□□□□ 0
NPHP4-211ENST00000622020 SHFQ7M4L6 423 aa15.05■□□□□ 0
NPHP4-211ENST00000622020 NPAS4Q8IUM7 802 aa15.05■□□□□ 0
NPHP4-211ENST00000622020 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.05■□□□□ 0
NPHP4-211ENST00000622020 SYT14Q8NB59 555 aa15.05■□□□□ 0
NPHP4-211ENST00000622020 DIRAS2Q96HU8 199 aa15.05■□□□□ 0
NPHP4-211ENST00000622020 RETREG1Q9H6L5 497 aa15.05■□□□□ 0
NPHP4-211ENST00000622020 CRNNQ9UBG3 495 aaPredicted RBP15.05■□□□□ 0
NPHP4-211ENST00000622020 A3GALT2U3KPV4 340 aa15.05■□□□□ 0
NPHP4-211ENST00000622020 V9GYH0 126 aa15.05■□□□□ 0
NPHP4-211ENST00000622020 NOTOA8MTQ0 251 aa15.05■□□□□ -0
NPHP4-211ENST00000622020 TLX2O43763 284 aaPredicted RBP15.05■□□□□ -0
NPHP4-211ENST00000622020 CD72P21854 359 aa15.05■□□□□ -0
NPHP4-211ENST00000622020 HNF4AP41235 474 aa15.05■□□□□ -0
NPHP4-211ENST00000622020 HNRNPA0Q13151 305 aaKnown RBP15.05■□□□□ -0
NPHP4-211ENST00000622020 EIF4HQ15056 248 aaKnown RBP15.05■□□□□ -0
NPHP4-211ENST00000622020 GRHL2Q6ISB3 625 aa15.05■□□□□ -0
NPHP4-211ENST00000622020 C22orf39Q6P5X5 142 aa15.05■□□□□ -0
NPHP4-211ENST00000622020 CEACAM20Q6UY09 585 aa15.05■□□□□ -0
NPHP4-211ENST00000622020 GEMIN6Q8WXD5 167 aaKnown RBP15.05■□□□□ -0
NPHP4-211ENST00000622020 CORO2BQ9UQ03 480 aa15.05■□□□□ -0
NPHP4-211ENST00000622020 KCNE2Q9Y6J6 123 aa15.05■□□□□ -0
NPHP4-211ENST00000622020 A0A1W2PRB8 838 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 IL3P08700 152 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 ITGA2P17301 1181 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 TIE1P35590 1138 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 LIMK1P53667 647 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 TLE2Q04725 743 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 ZNF763Q0D2J5 394 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 TRIM40Q6P9F5 258 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 OR52N2Q8NGI0 321 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 FCRL1Q96LA6 429 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 RSPO3Q9BXY4 272 aaPredicted RBP15.04■□□□□ -0
NPHP4-211ENST00000622020 OR2B2Q9GZK3 357 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 MIEF1Q9NQG6 463 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 PLAGL1Q9UM63 463 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 RNASET2O00584 256 aaKnown RBP15.04■□□□□ -0
NPHP4-211ENST00000622020 SEMA7AO75326 666 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 EIF2S1P05198 315 aaKnown RBP15.04■□□□□ -0
NPHP4-211ENST00000622020 URODP06132 367 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 PTPN2P17706 415 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 CBLP22681 906 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 PPIBP23284 216 aaKnown RBP15.04■□□□□ -0
NPHP4-211ENST00000622020 OPRD1P41143 372 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 RORCP51449 518 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 UBE3AQ05086 875 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 DBPQ10586 325 aaPredicted RBP15.04■□□□□ -0
NPHP4-211ENST00000622020 TARDBPQ13148 414 aaKnown RBP eCLIP15.04■□□□□ -09e-11■■■■■ 39.4
NPHP4-211ENST00000622020 Q5BKY6 102 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 PLEKHS1Q5SXH7 462 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 MED27Q6P2C8 311 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 CPA6Q8N4T0 437 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 RASGEF1AQ8N9B8 481 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 FAM46DQ8NEK8 389 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 CHAC2Q8WUX2 184 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 IL17FQ96PD4 163 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 CDCA4Q9BXL8 241 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 SLC6A16Q9GZN6 736 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 CCDC177Q9NQR7 707 aaPredicted RBP15.04■□□□□ -0
NPHP4-211ENST00000622020 FTSJ1Q9UET6 329 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 ITM2BQ9Y287 266 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 ENPP4Q9Y6X5 453 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 VCANP13611 3396 aa15.04■□□□□ -0
NPHP4-211ENST00000622020 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.03■□□□□ -0
NPHP4-211ENST00000622020 A0A1W2PQL4 384 aaPredicted RBP15.03■□□□□ -0
NPHP4-211ENST00000622020 ZAR1LA6NP61 321 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 H0YIV9 168 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 CAPN5O15484 640 aaPredicted RBP15.03■□□□□ -0
NPHP4-211ENST00000622020 MPC1LP0DKB6 136 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 TBPL1P62380 186 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 HSPB3Q12988 150 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 PIN1Q13526 163 aaPredicted RBP15.03■□□□□ -0
NPHP4-211ENST00000622020 CDKL4Q5MAI5 379 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 OR2G6Q5TZ20 316 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 BRAT1Q6PJG6 821 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 USP30Q70CQ3 517 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 CYB5D2Q8WUJ1 264 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 TMCO6Q96DC7 493 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 LSM7Q9UK45 103 aaKnown RBP15.03■□□□□ -0
NPHP4-211ENST00000622020 IGLV3-16A0A075B6K0 115 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 A0A1W2PRU2 124 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 C5orf58C9J3I9 102 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 RECKO95980 971 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 MAPK8P45983 427 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 PYDC2Q56P42 97 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 FAM209AQ5JX71 171 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 PPP2R2DQ66LE6 453 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 ASTLQ6HA08 431 aaPredicted RBP15.03■□□□□ -0
NPHP4-211ENST00000622020 TMEM220Q6QAJ8 160 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 CASP12Q6UXS9 341 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.03■□□□□ -0
NPHP4-211ENST00000622020 CFAP206Q8IYR0 622 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 DTX3Q8N9I9 347 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 ZNF480Q8WV37 535 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 OVCA2Q8WZ82 227 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 TM9SF2Q99805 663 aa15.03■□□□□ -0
NPHP4-211ENST00000622020 TSSK6Q9BXA6 273 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms