RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 OTOAQ7RTW8 1153 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 CEACAM19Q7Z692 300 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 MARCH9Q86YJ5 346 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 PHC2Q8IXK0 858 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 GBP7Q8N8V2 638 aaPredicted RBP3.41□□□□□ -1.86
BRCA1-229ENST00000621897 XXYLT1Q8NBI6 393 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 OR6J1Q8NGC5 347 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 OR52B6Q8NGF0 335 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 OR52K1Q8NGK4 314 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 SPSB1Q96BD6 273 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 ZNF414Q96IQ9 312 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 CNOT6LQ96LI5 555 aaKnown RBP3.41□□□□□ -1.86
BRCA1-229ENST00000621897 LRRC3BQ96PB8 259 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 LZTS2Q9BRK4 669 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 MLPHQ9BV36 600 aaPredicted RBP3.41□□□□□ -1.86
BRCA1-229ENST00000621897 SDCBP2Q9H190 292 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 ADNPQ9H2P0 1102 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 SLC35D1Q9NTN3 355 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 DDX18Q9NVP1 670 aaKnown RBP3.41□□□□□ -1.86
BRCA1-229ENST00000621897 NMRK1Q9NWW6 199 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 GTSE1Q9NYZ3 720 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 NLGN3Q9NZ94 848 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 SEPT10Q9P0V9 454 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 CLIP2Q9UDT6 1046 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 FAM153AQ9UHL3 310 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 LEF1Q9UJU2 399 aaPredicted RBP3.41□□□□□ -1.86
BRCA1-229ENST00000621897 POMT1Q9Y6A1 747 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 ATP8B3O60423 1300 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 TTC21BQ7Z4L5 1316 aa3.41□□□□□ -1.86
BRCA1-229ENST00000621897 A0A087WZ39 114 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 A0A1W2PRV1 198 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 ZSCAN5CA6NGD5 496 aaPredicted RBP3.4□□□□□ -1.87
BRCA1-229ENST00000621897 URADA6NGE7 173 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 C17orf105B2RV13 164 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 FAM86B1E9PN63 330 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 ANGPT2O15123 496 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 MAGEB3O15480 346 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 SAP30O75446 220 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 RECQL5O94762 991 aaPredicted RBP3.4□□□□□ -1.87
BRCA1-229ENST00000621897 SIX3O95343 332 aaPredicted RBP3.4□□□□□ -1.87
BRCA1-229ENST00000621897 PAHP00439 452 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 IFNB1P01574 187 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 CD59P13987 128 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 FDPSP14324 419 aaKnown RBP3.4□□□□□ -1.87
BRCA1-229ENST00000621897 CASTP20810 708 aaKnown RBP3.4□□□□□ -1.87
BRCA1-229ENST00000621897 ACHEP22303 614 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 CPT2P23786 658 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 CDC25CP30307 473 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 ETV1P50549 477 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 ATP4BP51164 291 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 NDST2P52849 883 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 DLK1P80370 383 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 FKBP3Q00688 224 aaKnown RBP3.4□□□□□ -1.87
BRCA1-229ENST00000621897 NPRL3Q12980 569 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 RIPK1Q13546 671 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 CUL2Q13617 745 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 SYCP1Q15431 976 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 DUSP5Q16690 384 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 ZRANB3Q5FWF4 1079 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 CCDC122Q5T0U0 273 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 ATP1A1-AS1Q5TC04 95 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 SHEQ5VZ18 495 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 PM20D1Q6GTS8 502 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 SLC25A24Q6NUK1 477 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 ANKRD33Q7Z3H0 272 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 CNTN4Q8IWV2 1026 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 FBXW8Q8N3Y1 598 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 OR4C15Q8NGM1 316 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 TYMSOSQ8TAI1 123 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 CCDC110Q8TBZ0 833 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 SSC4DQ8WTU2 575 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.4□□□□□ -1.87
BRCA1-229ENST00000621897 CFAP57Q96MR6 1250 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 ZNF396Q96N95 335 aaPredicted RBP3.4□□□□□ -1.87
BRCA1-229ENST00000621897 FAM111AQ96PZ2 611 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 ATF6BQ99941 703 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 CCDC28BQ9BUN5 200 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 UTP14AQ9BVJ6 771 aaKnown RBP3.4□□□□□ -1.87
BRCA1-229ENST00000621897 CCDC94Q9BW85 323 aaPredicted RBP3.4□□□□□ -1.87
BRCA1-229ENST00000621897 STMN4Q9H169 189 aaPredicted RBP3.4□□□□□ -1.87
BRCA1-229ENST00000621897 ABCG8Q9H221 673 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 ST6GALNAC4Q9H4F1 302 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 CRLF2Q9HC73 371 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 TEKT2Q9UIF3 430 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 PILRBQ9UKJ0 227 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 CHTOPQ9Y3Y2 248 aaKnown RBP3.4□□□□□ -1.87
BRCA1-229ENST00000621897 IL16Q14005 1332 aa3.4□□□□□ -1.87
BRCA1-229ENST00000621897 AKNAQ7Z591 1439 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 LRRIQ4A6NIV6 560 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 CTAGE5O15320 804 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 GPRIN2O60269 458 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 DIAPH2O60879 1101 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 STAMBPO95630 424 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 FYNP06241 537 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 EEF1B2P24534 225 aaKnown RBP3.39□□□□□ -1.87
BRCA1-229ENST00000621897 PIK3R1P27986 724 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 GDI1P31150 447 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 RFC4P35249 363 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 MAGEA4P43358 317 aa3.39□□□□□ -1.87
BRCA1-229ENST00000621897 GBX2P52951 348 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms