RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 RPSAP08865 295 aaKnown RBP20.33■□□□□ 0.85
SPAST-204ENST00000621856 NTSP30990 170 aa20.33■□□□□ 0.85
SPAST-204ENST00000621856 CAPZBP47756 277 aa20.33■□□□□ 0.85
SPAST-204ENST00000621856 AQP4P55087 323 aa20.33■□□□□ 0.85
SPAST-204ENST00000621856 PCBP4P57723 403 aaKnown RBP20.33■□□□□ 0.85
SPAST-204ENST00000621856 CSTF1Q05048 431 aaKnown RBP20.33■□□□□ 0.85
SPAST-204ENST00000621856 HSPB3Q12988 150 aa20.33■□□□□ 0.85
SPAST-204ENST00000621856 CMPK2Q5EBM0 449 aa20.33■□□□□ 0.85
SPAST-204ENST00000621856 ABHD13Q7L211 337 aa20.33■□□□□ 0.85
SPAST-204ENST00000621856 C19orf47Q8N9M1 422 aaKnown RBP20.33■□□□□ 0.85
SPAST-204ENST00000621856 BBS4Q96RK4 519 aa20.33■□□□□ 0.85
SPAST-204ENST00000621856 CHST8Q9H2A9 424 aa20.33■□□□□ 0.85
SPAST-204ENST00000621856 VCXQ9H320 206 aa20.33■□□□□ 0.85
SPAST-204ENST00000621856 ERVMER34-1Q9H9K5 563 aa20.33■□□□□ 0.85
SPAST-204ENST00000621856 NEUROD4Q9HD90 331 aa20.33■□□□□ 0.85
SPAST-204ENST00000621856 SLC35C2Q9NQQ7 365 aa20.33■□□□□ 0.85
SPAST-204ENST00000621856 SCN3AQ9NY46 2000 aa20.33■□□□□ 0.84
SPAST-204ENST00000621856 RNF103-CHMP3A0A140T963 221 aa20.33■□□□□ 0.84
SPAST-204ENST00000621856 TDGF1P13385 188 aa20.33■□□□□ 0.84
SPAST-204ENST00000621856 ZNF10P21506 573 aaPredicted RBP20.33■□□□□ 0.84
SPAST-204ENST00000621856 FRKP42685 505 aaPredicted RBP20.33■□□□□ 0.84
SPAST-204ENST00000621856 CASP9P55211 416 aa20.33■□□□□ 0.84
SPAST-204ENST00000621856 SIM2Q14190 667 aaPredicted RBP20.33■□□□□ 0.84
SPAST-204ENST00000621856 SPDYE7PQ495Y7 208 aa20.33■□□□□ 0.84
SPAST-204ENST00000621856 COX20Q5RI15 118 aa20.33■□□□□ 0.84
SPAST-204ENST00000621856 C18orf63Q68DL7 685 aa20.33■□□□□ 0.84
SPAST-204ENST00000621856 ENPP6Q6UWR7 440 aa20.33■□□□□ 0.84
SPAST-204ENST00000621856 CSNK1A1LQ8N752 337 aa20.33■□□□□ 0.84
SPAST-204ENST00000621856 TRAPPC9Q96Q05 1148 aa20.33■□□□□ 0.84
SPAST-204ENST00000621856 SERINC2Q96SA4 455 aa20.33■□□□□ 0.84
SPAST-204ENST00000621856 MAPKAP1Q9BPZ7 522 aa20.33■□□□□ 0.84
SPAST-204ENST00000621856 CHID1Q9BWS9 393 aa20.33■□□□□ 0.84
SPAST-204ENST00000621856 TRIM4Q9C037 500 aa20.33■□□□□ 0.84
SPAST-204ENST00000621856 AGPAT4Q9NRZ5 378 aa20.33■□□□□ 0.84
SPAST-204ENST00000621856 ACSS1Q9NUB1 689 aaPredicted RBP20.33■□□□□ 0.84
SPAST-204ENST00000621856 DCAF13Q9NV06 445 aaKnown RBP20.33■□□□□ 0.84
SPAST-204ENST00000621856 RAPGEFL1Q9UHV5 662 aa20.33■□□□□ 0.84
SPAST-204ENST00000621856 FAF1Q9UNN5 650 aaPredicted RBP20.33■□□□□ 0.84
SPAST-204ENST00000621856 TMEM131Q92545 1883 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 FAM149AA5PLN7 773 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 ZSCAN9O15535 394 aaPredicted RBP20.32■□□□□ 0.84
SPAST-204ENST00000621856 B3GALT2O43825 422 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 ERAL1O75616 437 aaKnown RBP20.32■□□□□ 0.84
SPAST-204ENST00000621856 PRKD3O94806 890 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 MT-ND1P03886 318 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 NUDT7P0C024 238 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 SMIM10L1P0DMW3 83 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 RAP2AP10114 183 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 ETFAP13804 333 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 IL1RNP18510 177 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 CTSKP43235 329 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 VSX2P58304 361 aaPredicted RBP20.32■□□□□ 0.84
SPAST-204ENST00000621856 ADRM1Q16186 407 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 DEFB134Q4QY38 66 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 LRRC23Q53EV4 343 aaPredicted RBP20.32■□□□□ 0.84
SPAST-204ENST00000621856 PMS2CLQ68D20 193 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 C11orf74Q86VG3 221 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 FAM86B1Q8N7N1 296 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 ANKFN1Q8N957 763 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 ZFP28Q8NHY6 868 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 POP5Q969H6 163 aaKnown RBP20.32■□□□□ 0.84
SPAST-204ENST00000621856 SLC47A1Q96FL8 570 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 SMIM10Q96HG1 83 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 TMEM121BQ9BXQ6 578 aaPredicted RBP20.32■□□□□ 0.84
SPAST-204ENST00000621856 YY1AP1Q9H869 796 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 ENTPD4Q9Y227 616 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 MAP4K5Q9Y4K4 846 aa20.32■□□□□ 0.84
SPAST-204ENST00000621856 SLC9B1P1A6NJY1 282 aa20.31■□□□□ 0.84
SPAST-204ENST00000621856 WASHC1A8K0Z3 465 aa20.31■□□□□ 0.84
SPAST-204ENST00000621856 PGRMC2O15173 223 aa20.31■□□□□ 0.84
SPAST-204ENST00000621856 PROM1O43490 865 aa20.31■□□□□ 0.84
SPAST-204ENST00000621856 CAPNS1P04632 268 aa20.31■□□□□ 0.84
SPAST-204ENST00000621856 BMP2P12643 396 aa20.31■□□□□ 0.84
SPAST-204ENST00000621856 BNIP3Q12983 259 aa20.31■□□□□ 0.84
SPAST-204ENST00000621856 FADDQ13158 208 aa20.31■□□□□ 0.84
SPAST-204ENST00000621856 GCNT6Q5T4J0 391 aa20.31■□□□□ 0.84
SPAST-204ENST00000621856 FAM92BQ6ZTR7 304 aa20.31■□□□□ 0.84
SPAST-204ENST00000621856 RNF130Q86XS8 419 aa20.31■□□□□ 0.84
SPAST-204ENST00000621856 C11orf65Q8NCR3 313 aa20.31■□□□□ 0.84
SPAST-204ENST00000621856 GAB3Q8WWW8 586 aa20.31■□□□□ 0.84
SPAST-204ENST00000621856 FAM60AQ9NP50 221 aa20.31■□□□□ 0.84
SPAST-204ENST00000621856 OLAHQ9NV23 265 aa20.31■□□□□ 0.84
SPAST-204ENST00000621856 PHF11Q9UIL8 331 aa20.31■□□□□ 0.84
SPAST-204ENST00000621856 PADI4Q9UM07 663 aa20.31■□□□□ 0.84
SPAST-204ENST00000621856 LDLRP01130 860 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 NR2F6P10588 404 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 ALOX12P18054 663 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 GPC1P35052 558 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 CDK9P50750 372 aaKnown RBP20.3■□□□□ 0.84
SPAST-204ENST00000621856 NCBP2P52298 156 aaKnown RBP eCLIP20.3■□□□□ 0.84
SPAST-204ENST00000621856 MVDP53602 400 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 SNRPNP63162 240 aaKnown RBP20.3■□□□□ 0.84
SPAST-204ENST00000621856 VEZF1Q14119 521 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 C16orf72Q14CZ0 275 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 MLC1Q15049 377 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 DEFB110Q30KQ9 67 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 MANEAQ5SRI9 462 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 C6orf132Q5T0Z8 1188 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 EID3Q8N140 333 aa20.3■□□□□ 0.84
SPAST-204ENST00000621856 GALNT4Q8N4A0 578 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms