RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 UTP23Q9BRU9 249 aaKnown RBP16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 HES7Q9BYE0 225 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 VIPAS39Q9H9C1 493 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 COPS7BQ9H9Q2 264 aaPredicted RBP16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 KCMF1Q9P0J7 381 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 SENP1Q9P0U3 644 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 ABI3Q9P2A4 366 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 OSGIN2Q9Y236 505 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 SLC5A6Q9Y289 635 aa16.79■□□□□ 0.28
SCAMP4-213ENST00000621748 MYO7BQ6PIF6 2116 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 GABRR3A8MPY1 467 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 CLDN4O14493 209 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 MYO1DO94832 1006 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 DDAH2O95865 285 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 PYGBP11216 843 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 MST1P26927 711 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 MAGEA12P43365 314 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 ALDH18A1P54886 795 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 PMP22Q01453 160 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 TGM3Q08188 693 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 SLC13A2Q13183 592 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 PCBP2Q15366 365 aaKnown RBP eCLIP16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 OR1C1Q15619 314 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 TECRLQ5HYJ1 363 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 ZNF468Q5VIY5 522 aaPredicted RBP16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 HIST2H2BCQ6DN03 193 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 GRHL2Q6ISB3 625 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 ZNF595Q8IYB9 648 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 LGI4Q8N135 537 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 APCDD1LQ8NCL9 501 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 ISL2Q96A47 359 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 PNO1Q9NRX1 252 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 PLEKHB1Q9UF11 243 aaPredicted RBP16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 DCDC2Q9UHG0 476 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 LGALS13Q9UHV8 139 aa16.78■□□□□ 0.28
SCAMP4-213ENST00000621748 SAP18O00422 153 aaKnown RBP16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 DYNC1I1O14576 645 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 COPEO14579 308 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 NEURL1O76050 574 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 WISP2O76076 250 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 SIX3O95343 332 aaPredicted RBP16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 ATP5A1P25705 553 aaKnown RBP16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 TPP2P29144 1249 aaPredicted RBP16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 KCNK10P57789 538 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 MLF1P58340 268 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 OC90Q02509 493 aaPredicted RBP16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 CLNKQ7Z7G1 428 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 ACOT4Q8N9L9 421 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 SRFBP1Q8NEF9 429 aaKnown RBP16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 B3GNT7Q8NFL0 401 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 DNAJB8Q8NHS0 232 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 HUS1BQ8NHY5 278 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 ADAMTS18Q8TE60 1221 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 SCMH1Q96GD3 660 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 C5orf34Q96MH7 638 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 MAPKAP1Q9BPZ7 522 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 TBCDQ9BTW9 1192 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 OR51B5Q9H339 312 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 PRM3Q9NNZ6 103 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 KLHL1Q9NR64 748 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 CPSF2Q9P2I0 782 aaKnown RBP16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 MRPS33Q9Y291 106 aaKnown RBP16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 ANGPTL3Q9Y5C1 460 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 PCDHGB6Q9Y5F9 930 aa16.77■□□□□ 0.28
SCAMP4-213ENST00000621748 MYOCOSA0A1B0GUC4 107 aa16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 A1L4Q6 167 aa16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 GOLGA8RI6L899 631 aa16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 CTNSO60931 367 aa16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 CRYABP02511 175 aaKnown RBP16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 GSTA1P08263 222 aa16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 RBP1P09455 135 aa16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 KRT4P19013 534 aa16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 HIST1H1TP22492 207 aaPredicted RBP16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 GPR143P51810 404 aa16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 DDX39BQ13838 428 aaKnown RBP16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 TERF2Q15554 542 aa16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 TMEM35AQ53FP2 167 aa16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 DEPDC1Q5TB30 811 aa16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 KHDRBS2Q5VWX1 349 aaKnown RBP16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 LIPJQ5W064 366 aa16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 CHSY3Q70JA7 882 aa16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 GOLGA7Q7Z5G4 137 aa16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 MYLK4Q86YV6 388 aaPredicted RBP16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 SRRM1Q8IYB3 904 aaKnown RBP16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 CMTM7Q96FZ5 175 aa16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 SORBS1Q9BX66 1292 aaKnown RBP16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 DEFB126Q9BYW3 111 aa16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 ROGDIQ9GZN7 287 aa16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 LYRM4Q9HD34 91 aa16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 LRFN1Q9P244 771 aa16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 ZNF223Q9UK11 482 aaPredicted RBP16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 PPIEQ9UNP9 301 aaKnown RBP16.76■□□□□ 0.27
SCAMP4-213ENST00000621748 TRBV11-1A0A0K0K1C0 115 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 LRRTM2O43300 516 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 GLRA3O75311 464 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 SERPINB1P30740 379 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 CLCN2P51788 898 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 GTF2H2Q13888 395 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 RCN2Q14257 317 aa16.75■□□□□ 0.27
SCAMP4-213ENST00000621748 AP5B1Q2VPB7 878 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms