RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 KCNH6Q9H252 994 aa17.61■□□□□ 0.41
SEMA6C-210ENST00000621728 SEMA5BQ9P283 1151 aa17.61■□□□□ 0.41
SEMA6C-210ENST00000621728 URADA6NGE7 173 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 SGK494L7N484 410 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 KCNH1O95259 989 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 CPNE6O95741 557 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 LDOC1O95751 146 aaPredicted RBP17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 AIFM1O95831 613 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 ATXN8OSP0DMR3 200 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 PCSK2P16519 638 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 TCN1P20061 433 aaPredicted RBP17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 PTPN6P29350 595 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 ARFIP1P53367 373 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 MTPNP58546 118 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 PIGGQ5H8A4 983 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 NANOGP8Q6NSW7 305 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 TMEM126BQ8IUX1 230 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 SLC15A3Q8IY34 581 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 OR9A4Q8NGU2 314 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 STARD8Q92502 1023 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 TMEM125Q96AQ2 219 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 EXOSC8Q96B26 276 aaKnown RBP17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 ITCHQ96J02 903 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 SLC41A2Q96JW4 573 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 ZNF285Q96NJ3 590 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 NR1H4Q96RI1 486 aaPredicted RBP17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 CSF3RQ99062 836 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 PRPF18Q99633 342 aaKnown RBP17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 CGREF1Q99674 301 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 NLNQ9BYT8 704 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 NANOGQ9H9S0 305 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 PARD6AQ9NPB6 346 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 TMEM181Q9P2C4 612 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 MAN2B2Q9Y2E5 1009 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 A0A1W2PS29 197 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 TMEM150CB9EJG8 249 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 SRPX2O60687 465 aaPredicted RBP17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 CD59P13987 128 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 HOXB9P17482 250 aaPredicted RBP17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 TSFMP43897 325 aaKnown RBP17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 TRA2BP62995 288 aaKnown RBP17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 CCNIQ14094 377 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 HEPACAMQ14CZ8 416 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 PRAMEF17Q5VTA0 474 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 ZFP1Q6P2D0 407 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 R3HCC1LQ7Z5L2 792 aaKnown RBP17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 CLEC4FQ8N1N0 589 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 SERINC2Q96SA4 455 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 EDEM2Q9BV94 578 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 VCXQ9H320 206 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 IKZF5Q9H5V7 419 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 RMND5AQ9H871 391 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 SPAG4Q9NPE6 437 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 SLAMF7Q9NQ25 335 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 FAM120CQ9NX05 1096 aaKnown RBP17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 KCMF1Q9P0J7 381 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 PCDHB14Q9Y5E9 798 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 PCDHGB2Q9Y5G2 931 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 PCDHA9Q9Y5H5 950 aa17.6■□□□□ 0.41
SEMA6C-210ENST00000621728 CUL9Q8IWT3 2517 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 A0A0A6YYC8 382 aaPredicted RBP17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 IGHV5-10-1A0A0J9YXX1 117 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 PRORSD1PA6NEY8 169 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 I3L1I5 382 aaPredicted RBP17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 RFXANKO14593 260 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 GALR3O60755 368 aaPredicted RBP17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 SMNDC1O75940 238 aaKnown RBP eCLIP17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 NELFEP18615 380 aaKnown RBP17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 SQSTM1Q13501 440 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 MANEAQ5SRI9 462 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 D2HGDHQ8N465 521 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 METTL27Q8N6F8 245 aaPredicted RBP17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 FAM47BQ8NA70 645 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 OR1L3Q8NH93 324 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 MTERF3Q96E29 417 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 PANX1Q96RD7 426 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 HOPXQ9BPY8 73 aaPredicted RBP17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 BHLHE41Q9C0J9 482 aaPredicted RBP17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 CHRNA10Q9GZZ6 450 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 ZNF768Q9H5H4 540 aaKnown RBP17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 SEMA4GQ9NTN9 838 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 USP22Q9UPT9 525 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 A0A096LPI6 279 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 TRBV5-3A0A0A0MS03 114 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 PRSS51A0A1B0GVH4 220 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 A6NHS1 94 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 H3BMH7 237 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 FLRT2O43155 660 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 PROM1O43490 865 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 B3GALT2O43825 422 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 PEX1O43933 1283 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 RDH16O75452 317 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 C6orf47O95873 294 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 ABCB1P08183 1280 aaPredicted RBP17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 PTGER1P34995 402 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 DUSP3P51452 185 aaPredicted RBP17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 LIM2P55344 173 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 ZNF750Q32MQ0 723 aa17.59■□□□□ 0.41
SEMA6C-210ENST00000621728 CARFQ8N187 725 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms