RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.41□□□□□ -0.9
CLTCL1-211ENST00000621271 C11orf98E9PRG8 122 aa9.41□□□□□ -0.9
CLTCL1-211ENST00000621271 BRINP1O60477 761 aa9.41□□□□□ -0.9
CLTCL1-211ENST00000621271 TSPAN9O75954 239 aa9.41□□□□□ -0.9
CLTCL1-211ENST00000621271 IGHEP01854 428 aa9.41□□□□□ -0.9
CLTCL1-211ENST00000621271 MERTKQ12866 999 aa9.41□□□□□ -0.9
CLTCL1-211ENST00000621271 TMEM35AQ53FP2 167 aa9.41□□□□□ -0.9
CLTCL1-211ENST00000621271 TMEM214Q6NUQ4 689 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-211ENST00000621271 ZER1Q7Z7L7 766 aa9.41□□□□□ -0.9
CLTCL1-211ENST00000621271 TMEFF1Q8IYR6 380 aa9.41□□□□□ -0.9
CLTCL1-211ENST00000621271 ZNF565Q8N9K5 539 aa9.41□□□□□ -0.9
CLTCL1-211ENST00000621271 DRAXINQ8NBI3 349 aaPredicted RBP9.41□□□□□ -0.9
CLTCL1-211ENST00000621271 NANOS1Q8WY41 292 aaKnown RBP9.41□□□□□ -0.9
CLTCL1-211ENST00000621271 NXPE2Q96DL1 559 aa9.41□□□□□ -0.9
CLTCL1-211ENST00000621271 GPR22Q99680 433 aa9.41□□□□□ -0.9
CLTCL1-211ENST00000621271 APOOQ9BUR5 198 aa9.41□□□□□ -0.9
CLTCL1-211ENST00000621271 NLGN3Q9NZ94 848 aa9.41□□□□□ -0.9
CLTCL1-211ENST00000621271 hCG_1807616A0A1W2PRN6 198 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 MEIS3P2A8K0S8 358 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 ABOP16442 354 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 P2RY2P41231 377 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 DGKQP52824 942 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 EMP2P54851 167 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 EEFSECP57772 596 aaKnown RBP9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 OGDHQ02218 1023 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 HNRNPA1L2Q32P51 320 aaKnown RBP9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 PLET1Q6UQ28 207 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 UNC5DQ6UXZ4 953 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 RELL1Q8IUW5 271 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 ASB9Q96DX5 294 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 CASD1Q96PB1 797 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 MCHR1Q99705 422 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 NENFQ9UMX5 172 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 CRYBG1Q9Y4K1 1723 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 METTL21EPA6NDL7 271 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 S1PR4O95977 384 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 HRGP04196 525 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 ZNF35P13682 527 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 CD9P21926 228 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 ACSL1P33121 698 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 SPINT3P49223 89 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 KCNJ11Q14654 390 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 RNF130Q86XS8 419 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 EID2Q8N6I1 236 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 NLGN4YQ8NFZ3 816 aaPredicted RBP9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 TMEM74Q96NL1 305 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 XYLT2Q9H1B5 865 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 ZNF639Q9UID6 485 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 MEMO1Q9Y316 297 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 DLG5Q8TDM6 1919 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 H3BSA7 217 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 TFECO14948 347 aaPredicted RBP9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 GSTT2BP0CG30 244 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 SRCP12931 536 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 ZNF28P17035 718 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 IL1RNP18510 177 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 DNAJB1P25685 340 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 MXD1Q05195 221 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 CARD17Q5XLA6 110 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 PACRGLQ8N7B6 248 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 BOLLQ8N9W6 283 aaKnown RBP9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 CHST14Q8NCH0 376 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 TOR1AIP2Q8NFQ8 470 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 NXPE3Q969Y0 559 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 HSPBAP1Q96EW2 488 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 BMFQ96LC9 184 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 ZFYVE21Q9BQ24 234 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 LAMP5Q9UJQ1 280 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 SLC7A11Q9UPY5 501 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 PCDHGA3Q9Y5H0 932 aa9.4□□□□□ -0.9
CLTCL1-211ENST00000621271 DNAJC25-GNG10A0A024R161 153 aa9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 TCRBV7S3A2A0A539 114 aa9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 SH3PXD2BA1X283 911 aa9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 FAM159BA6NKW6 160 aa9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 RLN2P04090 185 aa9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 F7P08709 466 aaPredicted RBP9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 PORP16435 677 aaPredicted RBP9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 GLP1RP43220 463 aa9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 ADAM17P78536 824 aa9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 SLC18A2Q05940 514 aa9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 OLIG2Q13516 323 aa9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 E2F2Q14209 437 aa9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 CDKN3Q16667 212 aa9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 DEFB110Q30KQ9 67 aa9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 TPRG1LQ5T0D9 272 aa9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 REEP3Q6NUK4 255 aa9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 PGBD2Q6P3X8 592 aa9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 LINGO2Q7L985 606 aa9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 C2CD4AQ8NCU7 369 aaPredicted RBP9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 NUP43Q8NFH3 380 aa9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 OR5P2Q8WZ92 322 aa9.4□□□□□ -0.91
CLTCL1-211ENST00000621271 IGKV6-21A0A0C4DH24 114 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 KIR2DS5A0A0G2JLQ3 304 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 A0A0G2JNG1 304 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 MYOCOSA0A1B0GUC4 107 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 A0A1B0GVT2 93 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 MBLAC1A4D2B0 266 aaPredicted RBP9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 ZNF487B1APH4 448 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 KIR2DS3K7RE56 304 aa9.39□□□□□ -0.91
CLTCL1-211ENST00000621271 TLR4O00206 839 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms