RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 OR4F6Q8NGB9 312 aa15.21■□□□□ 0.03
CD40-207ENST00000620709 OR52B2Q96RD2 323 aa15.21■□□□□ 0.03
CD40-207ENST00000620709 KCNA7Q96RP8 456 aa15.21■□□□□ 0.03
CD40-207ENST00000620709 NTMT1Q9BV86 223 aa15.21■□□□□ 0.03
CD40-207ENST00000620709 ATG10Q9H0Y0 220 aa15.21■□□□□ 0.03
CD40-207ENST00000620709 WDR55Q9H6Y2 383 aaPredicted RBP15.21■□□□□ 0.03
CD40-207ENST00000620709 MKKSQ9NPJ1 570 aaPredicted RBP15.21■□□□□ 0.03
CD40-207ENST00000620709 PFDN4Q9NQP4 134 aa15.21■□□□□ 0.03
CD40-207ENST00000620709 CCDC177Q9NQR7 707 aaPredicted RBP15.21■□□□□ 0.03
CD40-207ENST00000620709 ZNF225Q9UK10 706 aa15.21■□□□□ 0.03
CD40-207ENST00000620709 DNAJC15Q9Y5T4 150 aa15.21■□□□□ 0.03
CD40-207ENST00000620709 E9PBE3 544 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 COX6A1P12074 109 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 EPHA3P29320 983 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 EMP3P54852 163 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 TBPL1P62380 186 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 TBCCQ15814 346 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 ZXDCQ2QGD7 858 aaPredicted RBP15.2■□□□□ 0.02
CD40-207ENST00000620709 LSM12Q3MHD2 195 aaKnown RBP15.2■□□□□ 0.02
CD40-207ENST00000620709 GALNTL6Q49A17 601 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 GARNL3Q5VVW2 1013 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 ATG9BQ674R7 924 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 MILR1Q7Z6M3 343 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 AMER3Q8N944 861 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 SNX31Q8N9S9 440 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 OR56A3Q8NH54 315 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 BRIX1Q8TDN6 353 aaKnown RBP15.2■□□□□ 0.02
CD40-207ENST00000620709 ACTRT2Q8TDY3 377 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 MVB12AQ96EY5 273 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 MAGEB10Q96LZ2 347 aaPredicted RBP15.2■□□□□ 0.02
CD40-207ENST00000620709 CDK15Q96Q40 435 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 MACROD1Q9BQ69 325 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 C14orf105Q9NVL8 296 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 PLA2G3Q9NZ20 509 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 TRPS1Q9UHF7 1281 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 ERRFI1Q9UJM3 462 aaPredicted RBP15.2■□□□□ 0.02
CD40-207ENST00000620709 MKL2Q9ULH7 1088 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 MRPS2Q9Y399 296 aaKnown RBP15.2■□□□□ 0.02
CD40-207ENST00000620709 HIVEP3Q5T1R4 2406 aa15.2■□□□□ 0.02
CD40-207ENST00000620709 IGLV3-12A0A075B6K2 115 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 PIP5K1BO14986 540 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 FOXS1O43638 330 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 WFS1O76024 890 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 DDAH2O95865 285 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 F10P00742 488 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 CELA2AP08217 269 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 BNIP1Q12981 228 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 MFAP5Q13361 173 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 NAE1Q13564 534 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 TLR1Q15399 786 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 CRB2Q5IJ48 1285 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 NXNQ6DKJ4 435 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 IGFL2Q6UWQ7 119 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 DDIASQ8IXT1 998 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 LRRC56Q8IYG6 542 aaPredicted RBP15.19■□□□□ 0.02
CD40-207ENST00000620709 CDYL2Q8N8U2 506 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 OR1N1Q8NGS0 311 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 OR9A4Q8NGU2 314 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 CEP70Q8NHQ1 597 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 GRHL3Q8TE85 626 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 PYCR2Q96C36 320 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 CCT7Q99832 543 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 SAR1AQ9NR31 198 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 SLC22A14Q9Y267 594 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 SLC5A6Q9Y289 635 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 TIMM22Q9Y584 194 aa15.19■□□□□ 0.02
CD40-207ENST00000620709 PRR35P0CG20 571 aa15.18■□□□□ 0.02
CD40-207ENST00000620709 NCF2P19878 526 aaPredicted RBP15.18■□□□□ 0.02
CD40-207ENST00000620709 HMOX2P30519 316 aa15.18■□□□□ 0.02
CD40-207ENST00000620709 MINDY4Q4G0A6 757 aa15.18■□□□□ 0.02
CD40-207ENST00000620709 THOC6Q86W42 341 aaKnown RBP15.18■□□□□ 0.02
CD40-207ENST00000620709 ZCCHC10Q8TBK6 192 aa15.18■□□□□ 0.02
CD40-207ENST00000620709 METTL6Q8TCB7 284 aa15.18■□□□□ 0.02
CD40-207ENST00000620709 C5orf34Q96MH7 638 aa15.18■□□□□ 0.02
CD40-207ENST00000620709 TUBB6Q9BUF5 446 aa15.18■□□□□ 0.02
CD40-207ENST00000620709 ACTR8Q9H981 624 aa15.18■□□□□ 0.02
CD40-207ENST00000620709 TMEM184CQ9NVA4 438 aa15.18■□□□□ 0.02
CD40-207ENST00000620709 HCN3Q9P1Z3 774 aa15.18■□□□□ 0.02
CD40-207ENST00000620709 IGHV1-45A0A0A0MS14 117 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 FEZF1A0PJY2 475 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 DYTNA2CJ06 578 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 ATP5HO75947 161 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 CLDN9O95484 217 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 EPORP19235 508 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 TSFMP43897 325 aaKnown RBP15.17■□□□□ 0.02
CD40-207ENST00000620709 RPS15AP62244 130 aaKnown RBP15.17■□□□□ 0.02
CD40-207ENST00000620709 KRT72Q14CN4 511 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 GGTA1PQ4G0N0 100 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 CAPN13Q6MZZ7 669 aaPredicted RBP15.17■□□□□ 0.02
CD40-207ENST00000620709 FAM180AQ6UWF9 173 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 ZC3H7AQ8IWR0 971 aaKnown RBP15.17■□□□□ 0.02
CD40-207ENST00000620709 AMER2Q8N7J2 671 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 METTL21AQ8WXB1 218 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 LMF1Q96S06 567 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.17■□□□□ 0.02
CD40-207ENST00000620709 TUBB1Q9H4B7 451 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 MRGBPQ9NV56 204 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 RIC8BQ9NVN3 520 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 ARMCX1Q9P291 453 aa15.17■□□□□ 0.02
CD40-207ENST00000620709 SLC12A4Q9UP95 1085 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms