RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 RPLP0P6Q8NHW5 317 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 GPR78Q96P69 363 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 SLC29A3Q9BZD2 475 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 NKX6-2Q9C056 277 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 GPRC5BQ9NZH0 403 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 FPR1P21462 350 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 RGS6P49758 472 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 SORDQ00796 357 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 PDZK1IP1Q13113 114 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 DCAF15Q66K64 600 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 NLGN4YQ8NFZ3 816 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 OR6J1Q8NGC5 347 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 OR51G2Q8NGK0 314 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 GOT1L1Q8NHS2 421 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 LPPQ93052 612 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 HAVCR1Q96D42 359 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 QRFPRQ96P65 431 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 AARSD1Q9BTE6 412 aaKnown RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 AKAP7Q9P0M2 348 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 KIF13AQ9H1H9 1805 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 URODP06132 367 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 APEX1P27695 318 aaKnown RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 GABRB3P28472 473 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 GP2P55259 537 aaKnown RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 P2RY14Q15391 338 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 WNT8BQ93098 351 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 LRRIQ1Q96JM4 1722 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 HRO43593 1189 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 UBXN7O94888 489 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 CLDN9O95484 217 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 PTX3P26022 381 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 HSF5Q4G112 596 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 BRAT1Q6PJG6 821 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 SPRED1Q7Z699 444 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 FAM86B1Q8N7N1 296 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 OR52H1Q8NGJ2 320 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 HCAR2Q8TDS4 363 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 MINDY3Q9H8M7 445 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 GPN3Q9UHW5 284 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 RAI2Q9Y5P3 530 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 CAP2P40123 477 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 USP41Q3LFD5 358 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 PRSS36Q5K4E3 855 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 C4orf19Q8IY42 314 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF680Q8NEM1 530 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 B3GNT7Q8NFL0 401 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 PXT1Q8NFP0 134 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 MSLNLQ96KJ4 702 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 GLOD5A6NK44 160 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 BLOC1S5-TXNDC5H3BN57 136 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 GPR182O15218 404 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 CDK14O94921 469 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 GABARAPL2P60520 117 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 SMAD4Q13485 552 aaKnown RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 LYPD4Q6UWN0 246 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 MTSS1LQ765P7 747 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 PRSS45Q7RTY3 260 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 KIAA0319LQ8IZA0 1049 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 MAML2Q8IZL2 1156 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 BEND7Q8N7W2 519 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 OR10H5Q8NGA6 315 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 KCNN2Q9H2S1 579 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 RHPN2P1A8MT19 583 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 CERS1P27544 350 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 MEOX2P50222 304 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 VLDLRP98155 873 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 SNTB2Q13425 540 aaKnown RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF574Q6ZN55 896 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 ZER1Q7Z7L7 766 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 NPRL2Q8WTW4 380 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 GOLGA2P5Q9HBQ8 144 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 KNDC1Q76NI1 1749 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 A0A0U1RQK1 487 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 SPATA31C2B4DYI2 1134 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 SDC3O75056 442 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 LSSP48449 732 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 AP1S2P56377 157 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 GPR176Q14439 515 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 SEC23BQ15437 767 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 DUOXA1Q1HG43 343 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 CDONQ4KMG0 1287 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 LINC00116Q8NCU8 138 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 RFKQ969G6 155 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 FCRL2Q96LA5 508 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 PDGFDQ9GZP0 370 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 TXNL4BQ9NX01 149 aaKnown RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 FZD10Q9ULW2 581 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 PREX1Q8TCU6 1659 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 PRODHO43272 600 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 PAK4O96013 591 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 PRDX3P30048 256 aaKnown RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 SERPINF1P36955 418 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 MAD2L1BPQ15013 274 aaPredicted RBP4.84□□□□□ -1.63
VPS13D-214ENST00000620676 PTCHD3Q3KNS1 767 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 GSG1LQ6UXU4 331 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 TMUB2Q71RG4 321 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 GPR135Q8IZ08 494 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 BPIFCQ8NFQ6 507 aa4.84□□□□□ -1.63
VPS13D-214ENST00000620676 ANGPTL6Q8NI99 470 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms