RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 MYNNQ9NPC7 610 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 SERHLQ9NQF3 203 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 NECTIN3Q9NQS3 549 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 LYVE1Q9Y5Y7 322 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 F5P12259 2224 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 TSC2P49815 1807 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 CXorf51AA0A1B0GTR3 108 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 C17orf113A0A1B0GUU1 675 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 MID1O15344 667 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 LATO43561 262 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 LCKP06239 509 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 ALPPL2P10696 532 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 CD247P20963 164 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 RGS8P57771 180 aaPredicted RBP8.8□□□□□ -1
RBFOX1-223ENST00000620507 NCS1P62166 190 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 CDKN3Q16667 212 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 CRB2Q5IJ48 1285 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 TMEM236Q5W0B7 351 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 PIWIL3Q7Z3Z3 882 aaKnown RBP8.8□□□□□ -1
RBFOX1-223ENST00000620507 PDZD3Q86UT5 571 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 OR9Q2Q8NGE9 314 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 OR52E4Q8NGH9 312 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 HCAR2Q8TDS4 363 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 HTRA1Q92743 480 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 ARRDC3Q96B67 414 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 CRELD1Q96HD1 420 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 EPHX3Q9H6B9 360 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 TOR4AQ9NXH8 423 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 TEKT2Q9UIF3 430 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 ENPP5Q9UJA9 477 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 ENPP4Q9Y6X5 453 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 TRIM43BA6NCK2 446 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 K7ESM1 405 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 SEC14L2O76054 403 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 STSP08842 583 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 SLC35G6P0C7Q6 338 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 C8orf89P0DMQ9 161 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 IL1RNP18510 177 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 IRS1P35568 1242 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 TUBA1BP68363 451 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 MRPS15P82914 257 aaKnown RBP8.8□□□□□ -1
RBFOX1-223ENST00000620507 RUNX3Q13761 415 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 MICAQ29983 383 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 LCTLQ6UWM7 567 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 RNF165Q6ZSG1 346 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 TUBA1AQ71U36 451 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 TMEM179BQ7Z7N9 219 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 WDR20Q8TBZ3 569 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 ZNF675Q8TD23 568 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 RERGQ96A58 199 aaPredicted RBP8.8□□□□□ -1
RBFOX1-223ENST00000620507 TRIM43Q96BQ3 446 aaPredicted RBP8.8□□□□□ -1
RBFOX1-223ENST00000620507 MBOAT4Q96T53 435 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 GPN2Q9H9Y4 310 aaPredicted RBP8.8□□□□□ -1
RBFOX1-223ENST00000620507 PAK1IP1Q9NWT1 392 aaPredicted RBP8.8□□□□□ -1
RBFOX1-223ENST00000620507 MBD1Q9UIS9 605 aaPredicted RBP8.8□□□□□ -1
RBFOX1-223ENST00000620507 GSTK1Q9Y2Q3 226 aa8.8□□□□□ -1
RBFOX1-223ENST00000620507 RPL36Q9Y3U8 105 aaKnown RBP8.8□□□□□ -1
RBFOX1-223ENST00000620507 SAGE2PA6NJ88 616 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 LOC110117498-PIK3R3F6TDL0 507 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 TBX1O43435 398 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 CYP7B1O75881 506 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 CAPNS1P04632 268 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 CTSLP07711 333 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 OR12D1P0DN82 309 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 PRPH2P23942 346 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 FEN1P39748 380 aaKnown RBP8.79□□□□□ -1
RBFOX1-223ENST00000620507 MTAPQ13126 283 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 ZNF404Q494X3 552 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 ARTNQ5T4W7 220 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 ZNF776Q68DI1 518 aaPredicted RBP8.79□□□□□ -1
RBFOX1-223ENST00000620507 PLEKHM3Q6ZWE6 761 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 USP51Q70EK9 711 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 TECPR1Q7Z6L1 1165 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 FAM46DQ8NEK8 389 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 TMEM19Q96HH6 336 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 CNDP2Q96KP4 475 aaKnown RBP8.79□□□□□ -1
RBFOX1-223ENST00000620507 POLR2J2Q9GZM3 115 aaKnown RBP8.79□□□□□ -1
RBFOX1-223ENST00000620507 OCEL1Q9H607 264 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 SLC28A3Q9HAS3 691 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 CXXC1Q9P0U4 656 aaPredicted RBP8.79□□□□□ -1
RBFOX1-223ENST00000620507 WBP11Q9Y2W2 641 aaKnown RBP8.79□□□□□ -1
RBFOX1-223ENST00000620507 ST14Q9Y5Y6 855 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 AP1M2Q9Y6Q5 423 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 DOCK4Q8N1I0 1966 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 GREM1O60565 184 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 RASGRP1O95267 797 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 ETHE1O95571 254 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 JUNBP17275 347 aaPredicted RBP8.79□□□□□ -1
RBFOX1-223ENST00000620507 NOS3P29474 1203 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 ZFP36L2P47974 494 aaKnown RBP8.79□□□□□ -1
RBFOX1-223ENST00000620507 GRSF1Q12849 480 aaKnown RBP eCLIP8.79□□□□□ -1
RBFOX1-223ENST00000620507 CST6Q15828 149 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 CTU2Q2VPK5 515 aaKnown RBP8.79□□□□□ -1
RBFOX1-223ENST00000620507 PDZK1Q5T2W1 519 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 DUS1LQ6P1R4 473 aaKnown RBP8.79□□□□□ -1
RBFOX1-223ENST00000620507 CCDC116Q8IYX3 515 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 METTL4Q8N3J2 472 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 ZCCHC10Q8TBK6 192 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 KLHL6Q8WZ60 621 aa8.79□□□□□ -1
RBFOX1-223ENST00000620507 FGF13Q92913 245 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms