RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 SYNDIG1LA6NDD5 238 aa20.41■□□□□ 0.86
TRAF4-217ENST00000618771 SAP18O00422 153 aaKnown RBP20.41■□□□□ 0.86
TRAF4-217ENST00000618771 UGDHO60701 494 aa20.41■□□□□ 0.86
TRAF4-217ENST00000618771 CTNSO60931 367 aa20.41■□□□□ 0.86
TRAF4-217ENST00000618771 NEURL1O76050 574 aa20.41■□□□□ 0.86
TRAF4-217ENST00000618771 SCELO95171 688 aa20.41■□□□□ 0.86
TRAF4-217ENST00000618771 SIX3O95343 332 aaPredicted RBP20.41■□□□□ 0.86
TRAF4-217ENST00000618771 RBP1P09455 135 aa20.41■□□□□ 0.86
TRAF4-217ENST00000618771 HIST1H1TP22492 207 aaPredicted RBP20.41■□□□□ 0.86
TRAF4-217ENST00000618771 CNTFP26441 200 aa20.41■□□□□ 0.86
TRAF4-217ENST00000618771 EEF1DP29692 281 aaKnown RBP20.41■□□□□ 0.86
TRAF4-217ENST00000618771 PIK3CBP42338 1070 aa20.41■□□□□ 0.86
TRAF4-217ENST00000618771 SSR2P43308 183 aa20.41■□□□□ 0.86
TRAF4-217ENST00000618771 SRSF11Q05519 484 aaKnown RBP20.41■□□□□ 0.86
TRAF4-217ENST00000618771 ZNF468Q5VIY5 522 aaPredicted RBP20.41■□□□□ 0.86
TRAF4-217ENST00000618771 GFRALQ6UXV0 394 aa20.41■□□□□ 0.86
TRAF4-217ENST00000618771 RNF175Q8N4F7 328 aa20.41■□□□□ 0.86
TRAF4-217ENST00000618771 DCAKDQ8WVC6 231 aa20.41■□□□□ 0.86
TRAF4-217ENST00000618771 VMP1Q96GC9 406 aa20.41■□□□□ 0.86
TRAF4-217ENST00000618771 SCYL1Q96KG9 808 aa20.41■□□□□ 0.86
TRAF4-217ENST00000618771 IPPKQ9H8X2 491 aa20.41■□□□□ 0.86
TRAF4-217ENST00000618771 DMRT3Q9NQL9 472 aa20.41■□□□□ 0.86
TRAF4-217ENST00000618771 NFU1Q9UMS0 254 aa20.41■□□□□ 0.86
TRAF4-217ENST00000618771 PPIEQ9UNP9 301 aaKnown RBP20.41■□□□□ 0.86
TRAF4-217ENST00000618771 TSC22D4Q9Y3Q8 395 aa20.41■□□□□ 0.86
TRAF4-217ENST00000618771 SPACA6W5XKT8 324 aa20.41■□□□□ 0.86
TRAF4-217ENST00000618771 FCHO1O14526 889 aa20.4■□□□□ 0.86
TRAF4-217ENST00000618771 LRRTM2O43300 516 aa20.4■□□□□ 0.86
TRAF4-217ENST00000618771 IFNA16P05015 189 aa20.4■□□□□ 0.86
TRAF4-217ENST00000618771 CYB561P49447 251 aa20.4■□□□□ 0.86
TRAF4-217ENST00000618771 RAP1GDS1P52306 607 aa20.4■□□□□ 0.86
TRAF4-217ENST00000618771 PHEXP78562 749 aa20.4■□□□□ 0.86
TRAF4-217ENST00000618771 ELAVL1Q15717 326 aaKnown RBP20.4■□□□□ 0.86
TRAF4-217ENST00000618771 TSNAXIP1Q2TAA8 658 aa20.4■□□□□ 0.86
TRAF4-217ENST00000618771 DEPDC1Q5TB30 811 aa20.4■□□□□ 0.86
TRAF4-217ENST00000618771 METTL2BQ6P1Q9 378 aaKnown RBP20.4■□□□□ 0.86
TRAF4-217ENST00000618771 ARMC10Q8N2F6 343 aa20.4■□□□□ 0.86
TRAF4-217ENST00000618771 PTGR2Q8N8N7 351 aaPredicted RBP20.4■□□□□ 0.86
TRAF4-217ENST00000618771 NCLNQ969V3 563 aa20.4■□□□□ 0.86
TRAF4-217ENST00000618771 REPS1Q96D71 796 aa20.4■□□□□ 0.86
TRAF4-217ENST00000618771 MTERF1Q99551 399 aaKnown RBP20.4■□□□□ 0.86
TRAF4-217ENST00000618771 CENPKQ9BS16 269 aa20.4■□□□□ 0.86
TRAF4-217ENST00000618771 XPR1Q9UBH6 696 aa20.4■□□□□ 0.86
TRAF4-217ENST00000618771 TMCO1Q9UM00 188 aa20.4■□□□□ 0.86
TRAF4-217ENST00000618771 TRIM49D1C9J1S8 452 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 H0YIV9 168 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 SLC25A12O75746 678 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 UNC5CO95185 931 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 SP1P08047 785 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 STSP08842 583 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 COL6A2P12110 1019 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 GPR143P51810 404 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 PER3P56645 1201 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 STX4Q12846 297 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 CPSF6Q16630 551 aaKnown RBP eCLIP20.39■□□□□ 0.85
TRAF4-217ENST00000618771 OR4C11Q6IEV9 310 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 SLC25A25Q6KCM7 469 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 GALNTL5Q7Z4T8 443 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 TICAM1Q8IUC6 712 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 IFT20Q8IY31 132 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 TMEM132CQ8N3T6 1108 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 THAP3Q8WTV1 239 aaPredicted RBP20.39■□□□□ 0.85
TRAF4-217ENST00000618771 RGMAQ96B86 450 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 TRIM44Q96DX7 344 aaPredicted RBP20.39■□□□□ 0.85
TRAF4-217ENST00000618771 SORBS1Q9BX66 1292 aaKnown RBP20.39■□□□□ 0.85
TRAF4-217ENST00000618771 ALOXE3Q9BYJ1 711 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 SEC14L3Q9UDX4 400 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 ZNF223Q9UK11 482 aaPredicted RBP20.39■□□□□ 0.85
TRAF4-217ENST00000618771 FBXW2Q9UKT8 454 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 CLCA3PQ9Y6N3 262 aa20.39■□□□□ 0.85
TRAF4-217ENST00000618771 MYOCOSA0A1B0GUC4 107 aa20.38■□□□□ 0.85
TRAF4-217ENST00000618771 EXOC1LA0A1B0GW35 172 aa20.38■□□□□ 0.85
TRAF4-217ENST00000618771 LDB3O75112 727 aa20.38■□□□□ 0.85
TRAF4-217ENST00000618771 CPN2P22792 545 aa20.38■□□□□ 0.85
TRAF4-217ENST00000618771 TRHRP34981 398 aaPredicted RBP20.38■□□□□ 0.85
TRAF4-217ENST00000618771 HLCSP50747 726 aa20.38■□□□□ 0.85
TRAF4-217ENST00000618771 RPS13P62277 151 aaKnown RBP20.38■□□□□ 0.85
TRAF4-217ENST00000618771 C1QL3Q5VWW1 255 aa20.38■□□□□ 0.85
TRAF4-217ENST00000618771 FAM98AQ8NCA5 519 aaKnown RBP20.38■□□□□ 0.85
TRAF4-217ENST00000618771 PHF21BQ96EK2 531 aa20.38■□□□□ 0.85
TRAF4-217ENST00000618771 CCDC77Q9BR77 488 aa20.38■□□□□ 0.85
TRAF4-217ENST00000618771 TRIM45Q9H8W5 580 aaPredicted RBP20.38■□□□□ 0.85
TRAF4-217ENST00000618771 VTI1BQ9UEU0 232 aa20.38■□□□□ 0.85
TRAF4-217ENST00000618771 RNF11Q9Y3C5 154 aa20.38■□□□□ 0.85
TRAF4-217ENST00000618771 PCNX1Q96RV3 2341 aa20.38■□□□□ 0.85
TRAF4-217ENST00000618771 EML6Q6ZMW3 1958 aa20.37■□□□□ 0.85
TRAF4-217ENST00000618771 A0A1B0GUH1 482 aa20.37■□□□□ 0.85
TRAF4-217ENST00000618771 ASPDHA6ND91 283 aa20.37■□□□□ 0.85
TRAF4-217ENST00000618771 STX16-NPEPL1H3BU86 382 aa20.37■□□□□ 0.85
TRAF4-217ENST00000618771 PLPP1O14494 284 aa20.37■□□□□ 0.85
TRAF4-217ENST00000618771 STX16O14662 325 aa20.37■□□□□ 0.85
TRAF4-217ENST00000618771 NME2P1O60361 137 aa20.37■□□□□ 0.85
TRAF4-217ENST00000618771 SMIM24O75264 130 aa20.37■□□□□ 0.85
TRAF4-217ENST00000618771 ABHD2P08910 425 aa20.37■□□□□ 0.85
TRAF4-217ENST00000618771 NME2P22392 152 aa20.37■□□□□ 0.85
TRAF4-217ENST00000618771 ARL1P40616 181 aaPredicted RBP20.37■□□□□ 0.85
TRAF4-217ENST00000618771 SLAMF1Q13291 335 aa20.37■□□□□ 0.85
TRAF4-217ENST00000618771 SERTAD2Q14140 314 aa20.37■□□□□ 0.85
TRAF4-217ENST00000618771 MAPKAPK3Q16644 382 aa20.37■□□□□ 0.85
TRAF4-217ENST00000618771 ZNF227Q86WZ6 799 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms