RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 HIST1H1TP22492 207 aaPredicted RBP20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 RFC3P40938 356 aa20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 MEOX1P50221 254 aa20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 TGM3Q08188 693 aa20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 MED27Q6P2C8 311 aa20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 MTFR2Q6P444 385 aa20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 RPTNQ6XPR3 784 aa20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 NCCRP1Q6ZVX7 275 aaPredicted RBP20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 CYP4Z2PQ8N1L4 340 aa20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 ZNF321PQ8N8H1 164 aa20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 TMEM125Q96AQ2 219 aa20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 MRRFQ96E11 262 aaKnown RBP20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 TBCDQ9BTW9 1192 aa20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 SORBS1Q9BX66 1292 aaKnown RBP20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 SNX15Q9NRS6 342 aa20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 VTI1BQ9UEU0 232 aa20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 KLF13Q9Y2Y9 288 aaPredicted RBP20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 KLF2Q9Y5W3 355 aaPredicted RBP20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 EML6Q6ZMW3 1958 aa20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 LRRC14BA6NHZ5 514 aa20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 SAP18O00422 153 aaKnown RBP20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 HNRNPRO43390 633 aaKnown RBP20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 LDB3O75112 727 aa20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 ZFAND5O76080 213 aa20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 PTGER1P34995 402 aa20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 CASP6P55212 293 aa20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 NAA30Q147X3 362 aaPredicted RBP20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 SETDB1Q15047 1291 aa20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 CDSNQ15517 529 aa20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 TMEM35AQ53FP2 167 aa20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 GRHL2Q6ISB3 625 aa20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 C8orf74Q6P047 294 aa20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 BNC2Q6ZN30 1099 aaPredicted RBP20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 RHEBL1Q8TAI7 183 aa20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 SREK1Q8WXA9 508 aaKnown RBP20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 UBE2E3Q969T4 207 aa20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 ANKRD9Q96BM1 317 aaPredicted RBP20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 GPR78Q96P69 363 aa20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 ALOXE3Q9BYJ1 711 aa20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 ROGDIQ9GZN7 287 aa20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 OR51B5Q9H339 312 aa20.66■□□□□ 0.9
NEDD4L-237ENST00000617539 A0A087X1B8 175 aa20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 OR2J2O76002 312 aa20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 ALDOAP04075 364 aaKnown RBP20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 IFNA16P05015 189 aa20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 EPB42P16452 691 aa20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 SSR4P51571 173 aa20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 GPR85P60893 370 aa20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 ID2Q02363 134 aa20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 RCN2Q14257 317 aa20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 KHDRBS2Q5VWX1 349 aaKnown RBP20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 GHDCQ8N2G8 530 aa20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 TMEM132CQ8N3T6 1108 aa20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 TMEM156Q8N614 296 aa20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 TEX9Q8N6V9 391 aa20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 SRFBP1Q8NEF9 429 aaKnown RBP20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 HUS1BQ8NHY5 278 aa20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 CCDC77Q9BR77 488 aa20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 DEPPQ9NTK1 212 aa20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 NINJ2Q9NZG7 142 aa20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 MYOTQ9UBF9 498 aa20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 YARS2Q9Y2Z4 477 aaKnown RBP20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 MEMO1Q9Y316 297 aa20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 CLCA3PQ9Y6N3 262 aa20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 TACC2O95359 2948 aa20.65■□□□□ 0.9
NEDD4L-237ENST00000617539 PDZD2O15018 2839 aa20.64■□□□□ 0.9
NEDD4L-237ENST00000617539 CACNA1CQ13936 2221 aa20.64■□□□□ 0.89
NEDD4L-237ENST00000617539 PEX1O43933 1283 aa20.64■□□□□ 0.89
NEDD4L-237ENST00000617539 KLK8O60259 260 aa20.64■□□□□ 0.89
NEDD4L-237ENST00000617539 OR6B1O95007 311 aa20.64■□□□□ 0.89
NEDD4L-237ENST00000617539 SERPINB1P30740 379 aa20.64■□□□□ 0.89
NEDD4L-237ENST00000617539 SSR2P43308 183 aa20.64■□□□□ 0.89
NEDD4L-237ENST00000617539 CKAP4Q07065 602 aaKnown RBP20.64■□□□□ 0.89
NEDD4L-237ENST00000617539 PFKFB4Q16877 469 aa20.64■□□□□ 0.89
NEDD4L-237ENST00000617539 DEPDC1Q5TB30 811 aa20.64■□□□□ 0.89
NEDD4L-237ENST00000617539 ZFP62Q8NB50 900 aaPredicted RBP20.64■□□□□ 0.89
NEDD4L-237ENST00000617539 POGLUT1Q8NBL1 392 aa20.64■□□□□ 0.89
NEDD4L-237ENST00000617539 MORN4Q8NDC4 146 aa20.64■□□□□ 0.89
NEDD4L-237ENST00000617539 OR14A16Q8NHC5 309 aa20.64■□□□□ 0.89
NEDD4L-237ENST00000617539 CMTM7Q96FZ5 175 aa20.64■□□□□ 0.89
NEDD4L-237ENST00000617539 PHF12Q96QT6 1004 aa20.64■□□□□ 0.89
NEDD4L-237ENST00000617539 DMRT3Q9NQL9 472 aa20.64■□□□□ 0.89
NEDD4L-237ENST00000617539 CREBBPQ92793 2442 aa20.64■□□□□ 0.89
NEDD4L-237ENST00000617539 A0A096LPK6 155 aa20.63■□□□□ 0.89
NEDD4L-237ENST00000617539 SYNDIG1LA6NDD5 238 aa20.63■□□□□ 0.89
NEDD4L-237ENST00000617539 SYCE1LA8MT33 242 aa20.63■□□□□ 0.89
NEDD4L-237ENST00000617539 PLPP1O14494 284 aa20.63■□□□□ 0.89
NEDD4L-237ENST00000617539 ADAM10O14672 748 aa20.63■□□□□ 0.89
NEDD4L-237ENST00000617539 FGF17O60258 216 aa20.63■□□□□ 0.89
NEDD4L-237ENST00000617539 ZNF354AO60765 605 aaPredicted RBP20.63■□□□□ 0.89
NEDD4L-237ENST00000617539 HTR1EP28566 365 aa20.63■□□□□ 0.89
NEDD4L-237ENST00000617539 NR0B1P51843 470 aaKnown RBP20.63■□□□□ 0.89
NEDD4L-237ENST00000617539 HK2P52789 917 aa20.63■□□□□ 0.89
NEDD4L-237ENST00000617539 STX4Q12846 297 aa20.63■□□□□ 0.89
NEDD4L-237ENST00000617539 DDX39BQ13838 428 aaKnown RBP20.63■□□□□ 0.89
NEDD4L-237ENST00000617539 ZNF630Q2M218 657 aaPredicted RBP20.63■□□□□ 0.89
NEDD4L-237ENST00000617539 FAM83EQ2M2I3 478 aa20.63■□□□□ 0.89
NEDD4L-237ENST00000617539 CMPK2Q5EBM0 449 aa20.63■□□□□ 0.89
NEDD4L-237ENST00000617539 HSDL2Q6YN16 418 aa20.63■□□□□ 0.89
NEDD4L-237ENST00000617539 CHSY3Q70JA7 882 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms