RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 PDZD3Q86UT5 571 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 LSRQ86X29 649 aaPredicted RBP11.28□□□□□ -0.6
CDH5-208ENST00000614547 ST6GAL2Q96JF0 529 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 MGME1Q9BQP7 344 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 C2orf49Q9BVC5 232 aaPredicted RBP11.28□□□□□ -0.6
CDH5-208ENST00000614547 NDUFAF4Q9P032 175 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 MGAT4AQ9UM21 535 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 UNCXA6NJT0 531 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 KDELR3O43731 214 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 BPIP17213 487 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 NAT1P18440 290 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 PAICSP22234 425 aaKnown RBP11.28□□□□□ -0.6
CDH5-208ENST00000614547 NSG1P42857 185 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 MICAQ29983 383 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 ZNF791Q3KP31 576 aaPredicted RBP11.28□□□□□ -0.6
CDH5-208ENST00000614547 THOC6Q86W42 341 aaKnown RBP11.28□□□□□ -0.6
CDH5-208ENST00000614547 NLGN4YQ8NFZ3 816 aaPredicted RBP11.28□□□□□ -0.6
CDH5-208ENST00000614547 ZNF671Q8TAW3 534 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 GEMIN6Q8WXD5 167 aaKnown RBP11.28□□□□□ -0.6
CDH5-208ENST00000614547 MND1Q9BWT6 205 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 SORBS1Q9BX66 1292 aaKnown RBP11.28□□□□□ -0.6
CDH5-208ENST00000614547 TEX12Q9BXU0 123 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 EXTL2Q9UBQ6 330 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 TMPRSS11EQ9UL52 423 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 NRXN2Q9P2S2 1712 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.28□□□□□ -0.6
CDH5-208ENST00000614547 PPIBP23284 216 aaKnown RBP11.28□□□□□ -0.6
CDH5-208ENST00000614547 UGT2B10P36537 528 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 STK19P49842 368 aaPredicted RBP11.28□□□□□ -0.6
CDH5-208ENST00000614547 POU6F2P78424 691 aaPredicted RBP11.28□□□□□ -0.6
CDH5-208ENST00000614547 FAPQ12884 760 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 PIN1Q13526 163 aaPredicted RBP11.28□□□□□ -0.6
CDH5-208ENST00000614547 IRF3Q14653 427 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 MBTPS1Q14703 1052 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 LARS2Q15031 903 aaKnown RBP11.28□□□□□ -0.6
CDH5-208ENST00000614547 FRMPD2BQ6IN97 320 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 NXPE1Q8N323 547 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 ZNF366Q8N895 744 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 MYLIPQ8WY64 445 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 AKAP1Q92667 903 aaKnown RBP eCLIP11.28□□□□□ -0.6
CDH5-208ENST00000614547 FAM120CQ9NX05 1096 aaKnown RBP11.28□□□□□ -0.6
CDH5-208ENST00000614547 RNF186Q9NXI6 227 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 ZNF226Q9NYT6 803 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 ADAM30Q9UKF2 790 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 PCDHB8Q9UN66 801 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 ZFR2Q9UPR6 939 aaKnown RBP11.28□□□□□ -0.6
CDH5-208ENST00000614547 NCKAP1Q9Y2A7 1128 aa11.28□□□□□ -0.6
CDH5-208ENST00000614547 H3BQ06 376 aaPredicted RBP11.27□□□□□ -0.6
CDH5-208ENST00000614547 EEF1E1O43324 174 aaKnown RBP11.27□□□□□ -0.6
CDH5-208ENST00000614547 OR7A10O76100 309 aa11.27□□□□□ -0.6
CDH5-208ENST00000614547 DRD5P21918 477 aa11.27□□□□□ -0.6
CDH5-208ENST00000614547 ALAS2P22557 587 aa11.27□□□□□ -0.6
CDH5-208ENST00000614547 EVI2BP34910 448 aa11.27□□□□□ -0.6
CDH5-208ENST00000614547 SELENOWP63302 87 aa11.27□□□□□ -0.6
CDH5-208ENST00000614547 GAB1Q13480 694 aa11.27□□□□□ -0.6
CDH5-208ENST00000614547 DEFB115Q30KQ5 88 aa11.27□□□□□ -0.6
CDH5-208ENST00000614547 DDX53Q86TM3 631 aaKnown RBP11.27□□□□□ -0.6
CDH5-208ENST00000614547 ARL14EPQ8N8R7 260 aaPredicted RBP11.27□□□□□ -0.6
CDH5-208ENST00000614547 UFD1Q92890 307 aa11.27□□□□□ -0.6
CDH5-208ENST00000614547 SLC39A13Q96H72 371 aa11.27□□□□□ -0.6
CDH5-208ENST00000614547 TBC1D24Q9ULP9 559 aa11.27□□□□□ -0.6
CDH5-208ENST00000614547 STUB1Q9UNE7 303 aa11.27□□□□□ -0.6
CDH5-208ENST00000614547 MAP1BP46821 2468 aaKnown RBP11.27□□□□□ -0.61
CDH5-208ENST00000614547 CAPN5O15484 640 aaPredicted RBP11.27□□□□□ -0.61
CDH5-208ENST00000614547 AMD1P17707 334 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 HOXC13P31276 330 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 CTBP2P56545 445 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 DBPQ10586 325 aaPredicted RBP11.27□□□□□ -0.61
CDH5-208ENST00000614547 MZT2AQ6P582 158 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 SERPINA11Q86U17 422 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 IQCHQ86VS3 1027 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 DENND6BQ8NEG7 585 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 DNAJB8Q8NHS0 232 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 TEX47Q8TBZ9 253 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 PEX13Q92968 403 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 COL26A1Q96A83 441 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 CAPNS2Q96L46 248 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 C12orf66Q96MD2 445 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 PIP5K1AQ99755 562 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 P2RY13Q9BPV8 354 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 GPR62Q9BZJ7 368 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 ABCG5Q9H222 651 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 ZNF282Q9UDV7 671 aaPredicted RBP11.27□□□□□ -0.61
CDH5-208ENST00000614547 CORO2BQ9UQ03 480 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 SLC38A8A6NNN8 435 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 LYRM1O43325 122 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 ACLYP53396 1101 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 SLBPQ14493 270 aaKnown RBP eCLIP11.27□□□□□ -0.61
CDH5-208ENST00000614547 KRT33BQ14525 404 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 RASSF6Q6ZTQ3 369 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 ZNF551Q7Z340 670 aaPredicted RBP11.27□□□□□ -0.61
CDH5-208ENST00000614547 VN1R5Q7Z5H4 357 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 SLC30A8Q8IWU4 369 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 OR52P1PQ8NH57 321 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 RIT1Q92963 219 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 ZNF566Q969W8 418 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 NEU3Q9UQ49 428 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 ERVW-1Q9UQF0 538 aa11.27□□□□□ -0.61
CDH5-208ENST00000614547 TRBV4-1A0A0J9YWV2 114 aa11.26□□□□□ -0.61
CDH5-208ENST00000614547 GRXCR2A6NFK2 248 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms