RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 PCDH1Q08174 1060 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 MERTKQ12866 999 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 SIM2Q14190 667 aaPredicted RBP3.26□□□□□ -1.89
LIG4-205ENST00000614526 GANABQ14697 944 aaKnown RBP3.26□□□□□ -1.89
LIG4-205ENST00000614526 GPR19Q15760 415 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 ZIC1Q15915 447 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 NKAIN2Q5VXU1 208 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 PPP4R4Q6NUP7 873 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 ABHD17CQ6PCB6 329 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 TMEM107Q6UX40 140 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 CEP68Q76N32 757 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 VN1R4Q7Z5H5 301 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 ABI3BPQ7Z7G0 1075 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 ZDHHC13Q8IUH4 622 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 HORMAD2Q8N7B1 307 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 TNIP2Q8NFZ5 429 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 ARSGQ96EG1 525 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 SCARF2Q96GP6 870 aaPredicted RBP3.26□□□□□ -1.89
LIG4-205ENST00000614526 C16orf58Q96GQ5 468 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 C9orf16Q9BUW7 83 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 ADI1Q9BV57 179 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 LRRC61Q9BV99 259 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 NLNQ9BYT8 704 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 GRIP2Q9C0E4 1043 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 BHLHE41Q9C0J9 482 aaPredicted RBP3.26□□□□□ -1.89
LIG4-205ENST00000614526 QRSL1Q9H0R6 528 aaKnown RBP3.26□□□□□ -1.89
LIG4-205ENST00000614526 Q9H521 79 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 TBC1D17Q9HA65 648 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 FAM60AQ9NP50 221 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 PRDM7Q9NQW5 492 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 TMEM184CQ9NVA4 438 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 TMEM45AQ9NWC5 275 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 UCKL1Q9NWZ5 548 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 TRNAU1APQ9NX07 287 aaKnown RBP3.26□□□□□ -1.89
LIG4-205ENST00000614526 OR6C2Q9NZP2 312 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 ZNF282Q9UDV7 671 aaPredicted RBP3.26□□□□□ -1.89
LIG4-205ENST00000614526 MUTYHQ9UIF7 546 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 BTNL2Q9UIR0 455 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 DUSP12Q9UNI6 340 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 CLCA2Q9UQC9 943 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 TESMINQ9Y4I5 508 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 PCDHGA4Q9Y5G9 962 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 HEBP2Q9Y5Z4 205 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 A6NCN8 305 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 H0YGG7 62 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 TPST2O60704 377 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 LDB3O75112 727 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 CLEC3AO75596 197 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 GCM2O75603 506 aaPredicted RBP3.26□□□□□ -1.89
LIG4-205ENST00000614526 CCNDBP1O95273 360 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 AIFM1O95831 613 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 OR12D1P0DN82 309 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 ETS2P15036 469 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 POU3F3P20264 500 aaPredicted RBP3.26□□□□□ -1.89
LIG4-205ENST00000614526 PTNP21246 168 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 CD38P28907 300 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 RFX3P48380 749 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 CCT3P49368 545 aaKnown RBP3.26□□□□□ -1.89
LIG4-205ENST00000614526 MVDP53602 400 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 CRYBA2P53672 197 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 TPD52P55327 224 aaPredicted RBP3.26□□□□□ -1.89
LIG4-205ENST00000614526 ARF3P61204 181 aaPredicted RBP3.26□□□□□ -1.89
LIG4-205ENST00000614526 YPEL5P62699 121 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 CDK6Q00534 326 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 BNIP3Q12983 259 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 SCARB2Q14108 478 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 ERV3-1Q14264 604 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 LASP1Q14847 261 aaKnown RBP3.26□□□□□ -1.89
LIG4-205ENST00000614526 AMZ1Q400G9 498 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 CYBRD1Q53TN4 286 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 NHSL2Q5HYW2 709 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 FCRL6Q6DN72 434 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 PRR23BQ6ZRT6 265 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 USP53Q70EK8 1073 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 C6orf120Q7Z4R8 191 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 SERPINA11Q86U17 422 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 SATL1Q86VE3 508 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 DHRSXQ8N5I4 330 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 TRIML2Q8N7C3 387 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 AVL9Q8NBF6 648 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 C11orf65Q8NCR3 313 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 DENND6BQ8NEG7 585 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 VANGL1Q8TAA9 524 aaPredicted RBP3.26□□□□□ -1.89
LIG4-205ENST00000614526 SDCCAG3Q96C92 435 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 CNRIP1Q96F85 164 aaPredicted RBP3.26□□□□□ -1.89
LIG4-205ENST00000614526 DUS3LQ96G46 650 aaKnown RBP3.26□□□□□ -1.89
LIG4-205ENST00000614526 ZNF597Q96LX8 424 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 BTBD9Q96Q07 612 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 CSF3RQ99062 836 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 PHOX2BQ99453 314 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 RAB11FIP5Q9BXF6 653 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 GSDMCQ9BYG8 508 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 TRIM4Q9C037 500 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 MUC13Q9H3R2 512 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 GLIPR2Q9H4G4 154 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 SLC2A4RGQ9NR83 387 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 ZCCHC3Q9NUD5 404 aaKnown RBP3.26□□□□□ -1.89
LIG4-205ENST00000614526 ANKMY1Q9P2S6 941 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 RAB26Q9ULW5 256 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 SNX7Q9UNH6 387 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms