RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 RARRES3Q9UL19 164 aa16.59■□□□□ 0.25
SREK1-216ENST00000612404 SPACA6W5XKT8 324 aa16.59■□□□□ 0.25
SREK1-216ENST00000612404 FAM186AA6NE01 2351 aa16.59■□□□□ 0.25
SREK1-216ENST00000612404 C1orf226A1L170 272 aa16.58■□□□□ 0.25
SREK1-216ENST00000612404 NSA2O95478 260 aaKnown RBP16.58■□□□□ 0.25
SREK1-216ENST00000612404 NR2F6P10588 404 aa16.58■□□□□ 0.25
SREK1-216ENST00000612404 INSM1Q01101 510 aaPredicted RBP16.58■□□□□ 0.25
SREK1-216ENST00000612404 NIPAL1Q6NVV3 410 aa16.58■□□□□ 0.25
SREK1-216ENST00000612404 C16orf89Q6UX73 402 aa16.58■□□□□ 0.25
SREK1-216ENST00000612404 CA13Q8N1Q1 262 aa16.58■□□□□ 0.25
SREK1-216ENST00000612404 FAM47BQ8NA70 645 aa16.58■□□□□ 0.25
SREK1-216ENST00000612404 VPS37AQ8NEZ2 397 aa16.58■□□□□ 0.25
SREK1-216ENST00000612404 GTF2H4Q92759 462 aa16.58■□□□□ 0.25
SREK1-216ENST00000612404 CIDECQ96AQ7 238 aaPredicted RBP16.58■□□□□ 0.25
SREK1-216ENST00000612404 EXOSC8Q96B26 276 aaKnown RBP16.58■□□□□ 0.25
SREK1-216ENST00000612404 ROPN1LQ96C74 230 aa16.58■□□□□ 0.25
SREK1-216ENST00000612404 NPLQ9BXD5 320 aaPredicted RBP16.58■□□□□ 0.25
SREK1-216ENST00000612404 BHLHE41Q9C0J9 482 aaPredicted RBP16.58■□□□□ 0.25
SREK1-216ENST00000612404 SLC7A5P2Q9GIP4 190 aa16.58■□□□□ 0.25
SREK1-216ENST00000612404 WDR41Q9HAD4 459 aa16.58■□□□□ 0.25
SREK1-216ENST00000612404 GID8Q9NWU2 228 aa16.58■□□□□ 0.25
SREK1-216ENST00000612404 FAM120CQ9NX05 1096 aaKnown RBP16.58■□□□□ 0.25
SREK1-216ENST00000612404 MS4A12Q9NXJ0 267 aa16.58■□□□□ 0.25
SREK1-216ENST00000612404 SIDT1Q9NXL6 827 aaKnown RBP16.58■□□□□ 0.25
SREK1-216ENST00000612404 SLAMF8Q9P0V8 285 aa16.58■□□□□ 0.25
SREK1-216ENST00000612404 PCDHA9Q9Y5H5 950 aa16.58■□□□□ 0.25
SREK1-216ENST00000612404 WASHC1A8K0Z3 465 aa16.58■□□□□ 0.24
SREK1-216ENST00000612404 PGRMC2O15173 223 aa16.58■□□□□ 0.24
SREK1-216ENST00000612404 DDX5P17844 614 aaKnown RBP16.58■□□□□ 0.24
SREK1-216ENST00000612404 TLX1P31314 330 aaPredicted RBP16.58■□□□□ 0.24
SREK1-216ENST00000612404 WNT3P56703 355 aa16.58■□□□□ 0.24
SREK1-216ENST00000612404 CLDN6P56747 220 aa16.58■□□□□ 0.24
SREK1-216ENST00000612404 TNFRSF17Q02223 184 aa16.58■□□□□ 0.24
SREK1-216ENST00000612404 PRSS53Q2L4Q9 553 aa16.58■□□□□ 0.24
SREK1-216ENST00000612404 DNAL1Q4LDG9 190 aa16.58■□□□□ 0.24
SREK1-216ENST00000612404 DNAJC14Q6Y2X3 702 aaPredicted RBP16.58■□□□□ 0.24
SREK1-216ENST00000612404 DHDDSQ86SQ9 333 aa16.58■□□□□ 0.24
SREK1-216ENST00000612404 ITCHQ96J02 903 aa16.58■□□□□ 0.24
SREK1-216ENST00000612404 CSF3RQ99062 836 aa16.58■□□□□ 0.24
SREK1-216ENST00000612404 SLC39A3Q9BRY0 314 aa16.58■□□□□ 0.24
SREK1-216ENST00000612404 ENAMQ9NRM1 1142 aa16.58■□□□□ 0.24
SREK1-216ENST00000612404 TOR4AQ9NXH8 423 aa16.58■□□□□ 0.24
SREK1-216ENST00000612404 NDE1Q9NXR1 346 aa16.58■□□□□ 0.24
SREK1-216ENST00000612404 UTS2RQ9UKP6 389 aa16.58■□□□□ 0.24
SREK1-216ENST00000612404 MAU2Q9Y6X3 613 aa16.58■□□□□ 0.24
SREK1-216ENST00000612404 CHST10O43529 356 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 KCNH1O95259 989 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 ARSFP54793 590 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 SHC2P98077 582 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 NHLH1Q02575 133 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 CAPRIN1Q14444 709 aaKnown RBP16.57■□□□□ 0.24
SREK1-216ENST00000612404 ANXA8L1Q5VT79 327 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 MSANTD1Q6ZTZ1 278 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 TMEM126BQ8IUX1 230 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 SHISA5Q8N114 240 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 DPP10Q8N608 796 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 MCUR1Q96AQ8 359 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 LRRC58Q96CX6 371 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 INPP5KQ9BT40 448 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 EHD3Q9NZN3 535 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 CROTQ9UKG9 612 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 PCDHGA1Q9Y5H4 931 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 PRSS51A0A1B0GVH4 220 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 ERAL1O75616 437 aaKnown RBP16.57■□□□□ 0.24
SREK1-216ENST00000612404 CPSF4O95639 269 aaKnown RBP16.57■□□□□ 0.24
SREK1-216ENST00000612404 CCKBRP32239 447 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 MAT1AQ00266 395 aaKnown RBP16.57■□□□□ 0.24
SREK1-216ENST00000612404 TRMT5Q32P41 509 aaKnown RBP16.57■□□□□ 0.24
SREK1-216ENST00000612404 DHRS13Q6UX07 377 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 PPP1R3BQ86XI6 285 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 CLECL1Q8IZS7 167 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 MIEF2Q96C03 454 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 CADM1Q9BY67 442 aaKnown RBP16.57■□□□□ 0.24
SREK1-216ENST00000612404 RPF2Q9H7B2 306 aaKnown RBP16.57■□□□□ 0.24
SREK1-216ENST00000612404 APMAPQ9HDC9 416 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 AKAP7Q9P0M2 348 aaPredicted RBP16.57■□□□□ 0.24
SREK1-216ENST00000612404 SCN2AQ99250 2005 aa16.57■□□□□ 0.24
SREK1-216ENST00000612404 SEC16AO15027 2179 aa16.56■□□□□ 0.24
SREK1-216ENST00000612404 RFXANKO14593 260 aa16.56■□□□□ 0.24
SREK1-216ENST00000612404 PDPK1O15530 556 aa16.56■□□□□ 0.24
SREK1-216ENST00000612404 TBX19O60806 448 aa16.56■□□□□ 0.24
SREK1-216ENST00000612404 DNAJC8O75937 253 aaPredicted RBP16.56■□□□□ 0.24
SREK1-216ENST00000612404 ANP32DO95626 131 aa16.56■□□□□ 0.24
SREK1-216ENST00000612404 SIM1P81133 766 aaPredicted RBP16.56■□□□□ 0.24
SREK1-216ENST00000612404 SYT16Q17RD7 645 aa16.56■□□□□ 0.24
SREK1-216ENST00000612404 MPEG1Q2M385 716 aa16.56■□□□□ 0.24
SREK1-216ENST00000612404 C1orf189Q5VU69 101 aa16.56■□□□□ 0.24
SREK1-216ENST00000612404 YOD1Q5VVQ6 348 aaPredicted RBP16.56■□□□□ 0.24
SREK1-216ENST00000612404 PWWP2BQ6NUJ5 590 aa16.56■□□□□ 0.24
SREK1-216ENST00000612404 SLC48A1Q6P1K1 146 aa16.56■□□□□ 0.24
SREK1-216ENST00000612404 HACD2Q6Y1H2 254 aa16.56■□□□□ 0.24
SREK1-216ENST00000612404 PGAM4Q8N0Y7 254 aa16.56■□□□□ 0.24
SREK1-216ENST00000612404 PANX1Q96RD7 426 aa16.56■□□□□ 0.24
SREK1-216ENST00000612404 CTRCQ99895 268 aa16.56■□□□□ 0.24
SREK1-216ENST00000612404 THTPAQ9BU02 230 aa16.56■□□□□ 0.24
SREK1-216ENST00000612404 STRADBQ9C0K7 418 aa16.56■□□□□ 0.24
SREK1-216ENST00000612404 SERHLQ9NQF3 203 aa16.56■□□□□ 0.24
SREK1-216ENST00000612404 SRPK3Q9UPE1 567 aa16.56■□□□□ 0.24
SREK1-216ENST00000612404 TMEM184BQ9Y519 407 aaPredicted RBP16.56■□□□□ 0.24
SREK1-216ENST00000612404 NUP214P35658 2090 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms