RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 TRIM48Q8IWZ4 208 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 DTX3Q8N9I9 347 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 BTN2A2Q8WVV5 523 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 FCGR1BQ92637 280 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 NECTIN4Q96NY8 510 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 TTYH2Q9BSA4 534 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 CHST8Q9H2A9 424 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 C1GALT1Q9NS00 363 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 GPR52Q9Y2T5 361 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 H0YIV9 168 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 PRKRAO75569 313 aaKnown RBP13.41□□□□□ -0.26
COL6A1-207ENST00000612273 SLCO2B1O94956 709 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 AP2A2O94973 939 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 TIMP2P16035 220 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 CRISP1P54107 249 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 DEFA1P59665 94 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 DEFA3P59666 94 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 MESP2Q0VG99 397 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 RAB33AQ14088 237 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 IRF3Q14653 427 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 CCDC85BQ15834 202 aaPredicted RBP13.41□□□□□ -0.26
COL6A1-207ENST00000612273 HORMAD2Q8N7B1 307 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 NDEL1Q9GZM8 345 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 BTNL2Q9UIR0 455 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 TMCC3Q9ULS5 477 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 HS3ST2Q9Y278 367 aa13.41□□□□□ -0.26
COL6A1-207ENST00000612273 SZT2Q5T011 3432 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 M0R3H8 397 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 FFAR1O14842 300 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 HAT1O14929 419 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 LATO43561 262 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 PRMT3O60678 531 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 FURINP09958 794 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 PRPH2P23942 346 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 TEAD2Q15562 447 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 LRRC26Q2I0M4 334 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 SPIN4Q56A73 249 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 METTL2BQ6P1Q9 378 aaKnown RBP13.4□□□□□ -0.26
COL6A1-207ENST00000612273 HTR3DQ70Z44 454 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 OR52N2Q8NGI0 321 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 UBASH3BQ8TF42 649 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 HHIPQ96QV1 700 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 SLC30A2Q9BRI3 323 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 GULP1Q9UBP9 304 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 IL20RAQ9UHF4 553 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 TLR4O00206 839 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 CCRL2O00421 344 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 POLR2EP19388 210 aaKnown RBP13.4□□□□□ -0.26
COL6A1-207ENST00000612273 VIPR1P32241 457 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 NNMTP40261 264 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 DSTNP60981 165 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 MLLT1Q03111 559 aaPredicted RBP13.4□□□□□ -0.26
COL6A1-207ENST00000612273 SP140Q13342 867 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 GEMIN6Q8WXD5 167 aaKnown RBP13.4□□□□□ -0.26
COL6A1-207ENST00000612273 ZFYVE19Q96K21 471 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 NLNQ9BYT8 704 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 QRSL1Q9H0R6 528 aaKnown RBP13.4□□□□□ -0.26
COL6A1-207ENST00000612273 ANKRA2Q9H9E1 313 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 CPNE5Q9HCH3 593 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 SCN5AQ14524 2016 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 WASH3PC4AMC7 463 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 PLD2O14939 933 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 FRS3O43559 492 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 PSIP1O75475 530 aaKnown RBP13.4□□□□□ -0.26
COL6A1-207ENST00000612273 ARHGEF15O94989 841 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 ATXN8OSP0DMR3 200 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 BAK1Q16611 211 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 ZNF181Q2M3W8 571 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 CLEC12AQ5QGZ9 265 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 PNCKQ6P2M8 343 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 CASP12Q6UXS9 341 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 MINDY2Q8NBR6 621 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 TMEM19Q96HH6 336 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 BCL7BQ9BQE9 202 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 SLAMF7Q9NQ25 335 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 SEMA3GQ9NS98 782 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 FBXL12Q9NXK8 326 aa13.4□□□□□ -0.26
COL6A1-207ENST00000612273 PRR23AA6NEV1 266 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 RNASET2O00584 256 aaKnown RBP13.39□□□□□ -0.27
COL6A1-207ENST00000612273 MMP20O60882 483 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 CDRT1O95170 752 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 CH25HO95992 272 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 BMPR1AP36894 532 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 OR2G6Q5TZ20 316 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 HIST2H2AA3Q6FI13 130 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 GPR155Q7Z3F1 870 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 LACC1Q8IV20 430 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 TCEAL8Q8IYN2 117 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 CRIPAKQ8N1N5 446 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 SYT14Q8NB59 555 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 OR4C15Q8NGM1 316 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 OR5AR1Q8NGP9 310 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 SLC38A5Q8WUX1 472 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 COQ8BQ96D53 544 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 GPBP1L1Q9HC44 474 aaPredicted RBP13.39□□□□□ -0.27
COL6A1-207ENST00000612273 DMRT3Q9NQL9 472 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 TBC1D14Q9P2M4 693 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 TAC3Q9UHF0 121 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 PEX16Q9Y5Y5 336 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 ENPP4Q9Y6X5 453 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms