RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 CPAMD8Q8IZJ3 1885 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 BAHCC1Q9P281 2608 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 IGKV3D-11A0A0A0MRZ8 115 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 ANKUB1A6NFN9 424 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 GABRR3A8MPY1 467 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 A8MT66 165 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 C4orf51C9J302 202 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 CDH16O75309 829 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 SCELO95171 688 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 KRT6AP02538 564 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 KRT6BP04259 564 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 ATP5F1P24539 256 aaPredicted RBP11.54□□□□□ -0.56
CBWD3-208ENST00000612050 KRT6CP48668 564 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 GGTA1PQ4G0N0 100 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 PRR30Q53SZ7 412 aaPredicted RBP11.54□□□□□ -0.56
CBWD3-208ENST00000612050 ZNF766Q5HY98 468 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 FRG2Q64ET8 278 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 ADNP2Q6IQ32 1131 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 CLNKQ7Z7G1 428 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 GPR180Q86V85 440 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 SCUBE1Q8IWY4 988 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 BEST3Q8N1M1 668 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 ZCCHC7Q8N3Z6 543 aaKnown RBP11.54□□□□□ -0.56
CBWD3-208ENST00000612050 CATSPER1Q8NEC5 780 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 MYRIPQ8NFW9 859 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 DNAJB8Q8NHS0 232 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 PRR7Q8TB68 274 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 ELP5Q8TE02 316 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 GRHL3Q8TE85 626 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 TANKQ92844 425 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 RBM18Q96H35 190 aaKnown RBP11.54□□□□□ -0.56
CBWD3-208ENST00000612050 DGAT2Q96PD7 388 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 FRG2BQ96QU4 278 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 ALOXE3Q9BYJ1 711 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 CDCP1Q9H5V8 836 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 RPF2Q9H7B2 306 aaKnown RBP11.54□□□□□ -0.56
CBWD3-208ENST00000612050 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.54□□□□□ -0.56
CBWD3-208ENST00000612050 PPT2Q9UMR5 302 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 RNF11Q9Y3C5 154 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 CSAG2Q9Y5P2 127 aa11.54□□□□□ -0.56
CBWD3-208ENST00000612050 TRBV11-1A0A0K0K1C0 115 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 LRRC14BA6NHZ5 514 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 SMIM23A6NLE4 172 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 TCP11X1B4DZS4 312 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 H3BQF6 201 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 GOLGA8RI6L899 631 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 RTCAO00442 366 aaKnown RBP11.53□□□□□ -0.56
CBWD3-208ENST00000612050 DNAJB6O75190 326 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 ZFAND5O76080 213 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 SEMA3DO95025 777 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 SLU7O95391 586 aaKnown RBP11.53□□□□□ -0.56
CBWD3-208ENST00000612050 ZIC2O95409 532 aaPredicted RBP11.53□□□□□ -0.56
CBWD3-208ENST00000612050 F10P00742 488 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 MYL2P10916 166 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 EDN3P14138 238 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 HMOX2P30519 316 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 CYB561P49447 251 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 EFNA3P52797 238 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 PLIN5Q00G26 463 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 CLCQ05315 142 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 RBPJQ06330 500 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 RASA2Q15283 850 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 CCDC153Q494R4 210 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 FCRLBQ6BAA4 426 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 HOMEZQ8IX15 550 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 RIBC1Q8N443 379 aaPredicted RBP11.53□□□□□ -0.56
CBWD3-208ENST00000612050 TMEM156Q8N614 296 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 MORN4Q8NDC4 146 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 ST6GALNAC3Q8NDV1 305 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 OR4F6Q8NGB9 312 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 OR5L2Q8NGL0 311 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 FAR1Q8WVX9 515 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 SELENOMQ8WWX9 145 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 MTFMTQ96DP5 389 aaKnown RBP11.53□□□□□ -0.56
CBWD3-208ENST00000612050 CDK15Q96Q40 435 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 MAPKAP1Q9BPZ7 522 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 TXLNGYQ9BZA5 131 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 AICDAQ9GZX7 198 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 LRFN1Q9P244 771 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 TRPS1Q9UHF7 1281 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 GRID1Q9ULK0 1009 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 PCDHGB6Q9Y5F9 930 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 CFAP46Q8IYW2 2715 aa11.53□□□□□ -0.56
CBWD3-208ENST00000612050 CYR61O00622 381 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 PLPP1O14494 284 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 COPEO14579 308 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 OR7A17O14581 309 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 OR10H2O60403 315 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 CRCPO75575 148 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 RPS17P08708 135 aaKnown RBP11.52□□□□□ -0.56
CBWD3-208ENST00000612050 NR2F6P10588 404 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 PER3P56645 1201 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 TNFRSF17Q02223 184 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 ASPHQ12797 758 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 OR1C1Q15619 314 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 CFAP157Q5JU67 520 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 TDRPQ86YL5 185 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 OR52B6Q8NGF0 335 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 WDR20Q8TBZ3 569 aa11.52□□□□□ -0.56
CBWD3-208ENST00000612050 ZNF483Q8TF39 744 aaPredicted RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms