RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 SH3GLB1Q9Y371 365 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 ZNF451Q9Y4E5 1061 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 SNX11Q9Y5W9 270 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 LYVE1Q9Y5Y7 322 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 TRBC2A0A5B9 178 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 XPNPEP2O43895 674 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 TBX19O60806 448 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 HTR1AP08908 422 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 DDX5P17844 614 aaKnown RBP12.95□□□□□ -0.34
NEK3-205ENST00000610828 DCKP27707 260 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 SPIBQ01892 262 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 ELOAQ14241 798 aaKnown RBP12.95□□□□□ -0.34
NEK3-205ENST00000610828 FAHD1Q6P587 224 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 ENPP7Q6UWV6 458 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 SLC44A2Q8IWA5 706 aaPredicted RBP12.95□□□□□ -0.34
NEK3-205ENST00000610828 FBXL6Q8N531 539 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 NATD1Q8N6N6 113 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 HORMAD2Q8N7B1 307 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 ZNF420Q8TAQ5 688 aaPredicted RBP12.95□□□□□ -0.34
NEK3-205ENST00000610828 NEURL3Q96EH8 262 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 ZBED6CLQ96FA7 236 aaPredicted RBP12.95□□□□□ -0.34
NEK3-205ENST00000610828 OR2M4Q96R27 311 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 ZNF347Q96SE7 839 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 DPH7Q9BTV6 452 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 CCDC90BQ9GZT6 254 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 NAA50Q9GZZ1 169 aaKnown RBP12.95□□□□□ -0.34
NEK3-205ENST00000610828 KLHL31Q9H511 634 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 DDX31Q9H8H2 851 aaKnown RBP12.95□□□□□ -0.34
NEK3-205ENST00000610828 SLC6A20Q9NP91 592 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 TMEM184CQ9NVA4 438 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 SPHK1Q9NYA1 384 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 ADAM29Q9UKF5 820 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 HEMK1Q9Y5R4 338 aaPredicted RBP12.95□□□□□ -0.34
NEK3-205ENST00000610828 PIAS3Q9Y6X2 628 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 PRUNE2Q8WUY3 3088 aa12.95□□□□□ -0.34
NEK3-205ENST00000610828 PRAMEF25A6NGN4 478 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 C5orf58C9J3I9 102 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 H3BMQ9 156 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 HAT1O14929 419 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 AK4P27144 223 aaPredicted RBP12.94□□□□□ -0.34
NEK3-205ENST00000610828 GSTM2P28161 218 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 FMO3P31513 532 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 RPS6KA3P51812 740 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 CDH12P55289 794 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 PCBP3P57721 371 aaKnown RBP12.94□□□□□ -0.34
NEK3-205ENST00000610828 PCBP4P57723 403 aaKnown RBP12.94□□□□□ -0.34
NEK3-205ENST00000610828 NDUFAF5Q5TEU4 345 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 KIAA1614Q5VZ46 1190 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 SAXO2Q658L1 398 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 KIAA1324Q6UXG2 1013 aaKnown RBP12.94□□□□□ -0.34
NEK3-205ENST00000610828 ZNF793Q6ZN11 406 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 SZRD1Q7Z422 152 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 OR2L3Q8NG85 312 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 OR13F1Q8NGS4 319 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 COG8Q96MW5 612 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 ZNF300Q96RE9 604 aaPredicted RBP12.94□□□□□ -0.34
NEK3-205ENST00000610828 APOL4Q9BPW4 351 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 AICDAQ9GZX7 198 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 PAK1IP1Q9NWT1 392 aaPredicted RBP12.94□□□□□ -0.34
NEK3-205ENST00000610828 TBC1D29Q9UFV1 150 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 NDRG4Q9ULP0 352 aaKnown RBP12.94□□□□□ -0.34
NEK3-205ENST00000610828 SCML1Q9UN30 329 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 SNX5Q9Y5X3 404 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 SNRNP200O75643 2136 aaKnown RBP12.94□□□□□ -0.34
NEK3-205ENST00000610828 A0A0A6YYD5 115 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 J3KTA2 159 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 ERI3O43414 337 aaKnown RBP12.94□□□□□ -0.34
NEK3-205ENST00000610828 PRAMEF10O60809 474 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 BCHEP06276 602 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 CCDC159P0C7I6 412 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 JUNBP17275 347 aaPredicted RBP12.94□□□□□ -0.34
NEK3-205ENST00000610828 MATN1P21941 496 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 PEBP1P30086 187 aaKnown RBP12.94□□□□□ -0.34
NEK3-205ENST00000610828 MAPK10P53779 464 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 NPRL3Q12980 569 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 TP53BP2Q13625 1128 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 LRRC32Q14392 662 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 RPS26P11Q5JNZ5 115 aaPredicted RBP12.94□□□□□ -0.34
NEK3-205ENST00000610828 REEP3Q6NUK4 255 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 C6orf120Q7Z4R8 191 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 GIPC3Q8TF64 312 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 FBLIM1Q8WUP2 373 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 GEMIN6Q8WXD5 167 aaKnown RBP12.94□□□□□ -0.34
NEK3-205ENST00000610828 RAB8BQ92930 207 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 SCARF2Q96GP6 870 aaPredicted RBP12.94□□□□□ -0.34
NEK3-205ENST00000610828 MRGPRX1Q96LB2 322 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 NODALQ96S42 347 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 LHPPQ9H008 270 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 KLHL20Q9Y2M5 609 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 COLEC10Q9Y6Z7 277 aa12.94□□□□□ -0.34
NEK3-205ENST00000610828 A0A1B0GVG6 124 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 GLOD5A6NK44 160 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 ISM1B1AKI9 464 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 PRICKLE3O43900 615 aaPredicted RBP12.93□□□□□ -0.34
NEK3-205ENST00000610828 PRKRAO75569 313 aaKnown RBP12.93□□□□□ -0.34
NEK3-205ENST00000610828 ATE1O95260 518 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 EML2O95834 649 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 ITGA2P17301 1181 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 ACSL1P33121 698 aa12.93□□□□□ -0.34
NEK3-205ENST00000610828 FRKP42685 505 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms