RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 SH3GLB1Q9Y371 365 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 UMODL1Q5DID0 1318 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 KIAA1217Q5T5P2 1943 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 IGHV3-20A0A0C4DH32 117 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 ATP6AP2A0A1C7CYW4 349 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 A8MU76 341 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 CALCAP01258 141 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 CHRNGP07510 517 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 LYNP07948 512 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 NUDT17P0C025 328 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 ZNF883P0CG24 379 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 P4HA1P13674 534 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 FERP16591 822 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 OR1D2P34982 312 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 TNFSF10P50591 281 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 ZNF131P52739 623 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 NDST2P52849 883 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 AP1B1Q10567 949 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 NFATC2Q13469 925 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 KIAA0141Q14154 515 aaPredicted RBP3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 GIT2Q14161 759 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 RFTN2Q52LD8 501 aaPredicted RBP3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 TAF1BQ53T94 588 aaPredicted RBP3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 FAAP20Q6NZ36 180 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 TOM1L2Q6ZVM7 507 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 SERPINA12Q8IW75 414 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 Q8NBF4 154 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 CCDC197Q8NCU1 140 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 PRCCQ92733 491 aaPredicted RBP3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 ATP6V0A1Q93050 837 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 PRICKLE1Q96MT3 831 aaPredicted RBP3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 ERGIC2Q96RQ1 377 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 NTMT1Q9BV86 223 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 TSPYL1Q9H0U9 437 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 ABCG4Q9H172 646 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 MED17Q9NVC6 651 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 DCAF16Q9NXF7 216 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 EXOC7Q9UPT5 735 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 FOXA2Q9Y261 457 aaPredicted RBP3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 MRPS18CQ9Y3D5 142 aaKnown RBP3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 RNF215Q9Y6U7 377 aa3.58□□□□□ -1.84
SMCHD1-213ENST00000609587 IGKV3D-15A0A087WSY6 115 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 A0A0J9YWU9 116 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 SRRM4A7MD48 611 aaKnown RBP3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 SOCS3O14543 225 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 TRAFD1O14545 582 aaPredicted RBP3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 HTATSF1O43719 755 aaKnown RBP3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 GMNNO75496 209 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 OLFM2O95897 454 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 EPOP01588 193 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 THEGLP0DJG4 465 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 B4GALT1P15291 398 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 SELEP16581 610 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 CCR4P51679 360 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 KCNK10P57789 538 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 GABPAQ06546 454 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 PDE7AQ13946 482 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 MLF2Q15773 248 aaPredicted RBP3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 CAPN13Q6MZZ7 669 aaPredicted RBP3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 LCA5Q86VQ0 697 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 NBPF5PQ86XG9 351 aaPredicted RBP3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 CACUL1Q86Y37 369 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 CNTN4Q8IWV2 1026 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 SIDT2Q8NBJ9 832 aaKnown RBP3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 OR8H1Q8NGG4 311 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 C8orf46Q8TAG6 207 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 MGARPQ8TDB4 240 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 EEF2KMTQ96G04 330 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 GAL3ST4Q96RP7 486 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 SSX3Q99909 188 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 PINK1Q9BXM7 581 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 GFRA4Q9GZZ7 299 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 MARCH7Q9H992 704 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 GPN1Q9HCN4 374 aaPredicted RBP3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 ZCCHC3Q9NUD5 404 aaKnown RBP3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 TEKT2Q9UIF3 430 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 OR1A2Q9Y585 309 aa3.57□□□□□ -1.84
SMCHD1-213ENST00000609587 IGHV3-38A0A0C4DH36 116 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 ASB14A6NK59 587 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 ERI2A8K979 691 aaKnown RBP3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 CCSO14618 274 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 PRDM1O75626 825 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 STBD1O95210 358 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 CPNE6O95741 557 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 STIP1P31948 543 aaKnown RBP3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 FCGR2BP31994 310 aaPredicted RBP3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 FCGR2CP31995 323 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 RPL9P32969 192 aaKnown RBP3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 ABCE1P61221 599 aaKnown RBP3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 RBBP4Q09028 425 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 CBX3Q13185 183 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 GK2Q14410 553 aaPredicted RBP3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 STX1AQ16623 288 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 UPP1Q16831 310 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 HFEQ30201 348 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 MS4A18Q3C1V0 323 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 DOK6Q6PKX4 331 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 B3GLCTQ6Y288 498 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 ZNF410Q86VK4 478 aa3.56□□□□□ -1.84
SMCHD1-213ENST00000609587 KRTAP7-1Q8IUC3 87 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms