RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 S100PP25815 95 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 OXTRP30559 389 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 SDC4P31431 198 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 CA5AP35218 305 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 HNF1BP35680 557 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 SLC19A1P41440 591 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 CCT3P49368 545 aaKnown RBP4.87□□□□□ -1.63
SSX9-202ENST00000608568 CDKN1CP49918 316 aaPredicted RBP4.87□□□□□ -1.63
SSX9-202ENST00000608568 RORCP51449 518 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 ARHGDIBP52566 201 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 ATXN1P54253 815 aaKnown RBP4.87□□□□□ -1.63
SSX9-202ENST00000608568 NAGLUP54802 743 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 RAG2P55895 527 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 SNX16P57768 344 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 DYNLT1P63172 113 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 NFKB2Q00653 900 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 CD83Q01151 205 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 IL5RAQ01344 420 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 LIPEQ05469 1076 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 STX4Q12846 297 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 SF3A2Q15428 464 aaKnown RBP4.87□□□□□ -1.63
SSX9-202ENST00000608568 SURF1Q15526 300 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 KYAT1Q16773 422 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 TIGD6Q17RP2 521 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 GPR33Q49SQ1 333 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 TM4SF20Q53R12 229 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 TMEM196Q5HYL7 178 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 FAM209BQ5JX69 171 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 OTUD3Q5T2D3 398 aaPredicted RBP4.87□□□□□ -1.63
SSX9-202ENST00000608568 SAMD5Q5TGI4 173 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 LCN1P1Q5VSP4 162 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 KANK2Q63ZY3 851 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 TMEM198Q66K66 360 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 SLFN12LQ6IEE8 588 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 LAIR2Q6ISS4 152 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 SLC26A9Q7LBE3 791 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 PRICKLE2Q7Z3G6 844 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 REC114Q7Z4M0 266 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 HSD17B13Q7Z5P4 300 aaPredicted RBP4.87□□□□□ -1.63
SSX9-202ENST00000608568 SNX20Q7Z614 316 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 LSRQ86X29 649 aaPredicted RBP4.87□□□□□ -1.63
SSX9-202ENST00000608568 FUNDC1Q8IVP5 155 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 CCDC117Q8IWD4 279 aaPredicted RBP4.87□□□□□ -1.63
SSX9-202ENST00000608568 SCN4BQ8IWT1 228 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 YAF2Q8IY57 180 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 ZZZ3Q8IYH5 903 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 OR8H3Q8N146 312 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 STPG2Q8N412 459 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 TMEM151AQ8N4L1 468 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 MEIOBQ8N635 442 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 LRRC17Q8N6Y2 441 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 LRRC52Q8N7C0 313 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 ARL14EPQ8N8R7 260 aaPredicted RBP4.87□□□□□ -1.63
SSX9-202ENST00000608568 C19orf47Q8N9M1 422 aaKnown RBP4.87□□□□□ -1.63
SSX9-202ENST00000608568 SRFBP1Q8NEF9 429 aaKnown RBP4.87□□□□□ -1.63
SSX9-202ENST00000608568 LPCAT1Q8NF37 534 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 OR8J3Q8NGG0 315 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 OR6S1Q8NH40 331 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 CDC26Q8NHZ8 85 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 WDR36Q8NI36 951 aaKnown RBP4.87□□□□□ -1.63
SSX9-202ENST00000608568 CSGALNACT1Q8TDX6 532 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 AP3S1Q92572 193 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 NINJ1Q92982 152 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 RELTQ969Z4 430 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 OTULINQ96BN8 352 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 SPATA13Q96N96 652 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 CNTNAP3BQ96NU0 1288 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 COL21A1Q96P44 957 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 PPP1R2P1Q96PQ5 205 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 PITX2Q99697 317 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 P2RY13Q9BPV8 354 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 ZNF251Q9BRH9 671 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 CINPQ9BW66 212 aaPredicted RBP4.87□□□□□ -1.63
SSX9-202ENST00000608568 NUSAP1Q9BXS6 441 aaKnown RBP4.87□□□□□ -1.63
SSX9-202ENST00000608568 HDHD5Q9BXW7 423 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 KRTAP4-6Q9BYQ5 205 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 CNTNAP3Q9BZ76 1288 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 AMBRA1Q9C0C7 1298 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 RNF32Q9H0A6 362 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 XYLT2Q9H1B5 865 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 SMURF1Q9HCE7 757 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 KRT84Q9NSB2 600 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 ABCC13Q9NSE7 274 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 CATSPERZQ9NTU4 200 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 KLHL11Q9NVR0 708 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 KCTD5Q9NXV2 234 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 COA4Q9NYJ1 87 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 ZIM2Q9NZV7 527 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 RCOR3Q9P2K3 495 aaPredicted RBP4.87□□□□□ -1.63
SSX9-202ENST00000608568 EXTL2Q9UBQ6 330 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.87□□□□□ -1.63
SSX9-202ENST00000608568 SLC23A1Q9UHI7 598 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 SFMBT1Q9UHJ3 866 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 AGO1Q9UL18 857 aaKnown RBP4.87□□□□□ -1.63
SSX9-202ENST00000608568 SNX6Q9UNH7 406 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 CYP8B1Q9UNU6 501 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 MFHAS1Q9Y4C4 1052 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 MAGED1Q9Y5V3 778 aaPredicted RBP4.87□□□□□ -1.63
SSX9-202ENST00000608568 SNX8Q9Y5X2 465 aa4.87□□□□□ -1.63
SSX9-202ENST00000608568 OAS3Q9Y6K5 1087 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms