RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 TRIM45Q9H8W5 580 aaPredicted RBP16.9■□□□□ 0.3
CCDC12-208ENST00000603885 ACTR8Q9H981 624 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 KCMF1Q9P0J7 381 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 CPSF2Q9P2I0 782 aaKnown RBP16.9■□□□□ 0.3
CCDC12-208ENST00000603885 PCDHGA11Q9Y5H2 935 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 TNPO3Q9Y5L0 923 aaKnown RBP16.9■□□□□ 0.3
CCDC12-208ENST00000603885 CLCA3PQ9Y6N3 262 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 SAP18O00422 153 aaKnown RBP16.89■□□□□ 0.29
CCDC12-208ENST00000603885 NME2P1O60361 137 aa16.89■□□□□ 0.29
CCDC12-208ENST00000603885 SCELO95171 688 aa16.89■□□□□ 0.29
CCDC12-208ENST00000603885 NME2P22392 152 aa16.89■□□□□ 0.29
CCDC12-208ENST00000603885 PIK3CBP42338 1070 aa16.89■□□□□ 0.29
CCDC12-208ENST00000603885 PIK3CGP48736 1102 aa16.89■□□□□ 0.29
CCDC12-208ENST00000603885 RAP1GDS1P52306 607 aa16.89■□□□□ 0.29
CCDC12-208ENST00000603885 PHEXP78562 749 aa16.89■□□□□ 0.29
CCDC12-208ENST00000603885 ALDH6A1Q02252 535 aaKnown RBP16.89■□□□□ 0.29
CCDC12-208ENST00000603885 PCBP2Q15366 365 aaKnown RBP eCLIP16.89■□□□□ 0.293e-6■■■■□ 24.1
CCDC12-208ENST00000603885 TECRLQ5HYJ1 363 aa16.89■□□□□ 0.29
CCDC12-208ENST00000603885 DEPDC1Q5TB30 811 aa16.89■□□□□ 0.29
CCDC12-208ENST00000603885 METTL2BQ6P1Q9 378 aaKnown RBP16.89■□□□□ 0.29
CCDC12-208ENST00000603885 HUS1BQ8NHY5 278 aa16.89■□□□□ 0.29
CCDC12-208ENST00000603885 DAZLQ92904 295 aaKnown RBP16.89■□□□□ 0.29
CCDC12-208ENST00000603885 RELTQ969Z4 430 aa16.89■□□□□ 0.29
CCDC12-208ENST00000603885 ISL2Q96A47 359 aa16.89■□□□□ 0.29
CCDC12-208ENST00000603885 REPS1Q96D71 796 aa16.89■□□□□ 0.29
CCDC12-208ENST00000603885 FRMD6Q96NE9 622 aa16.89■□□□□ 0.29
CCDC12-208ENST00000603885 PAFAH2Q99487 392 aa16.89■□□□□ 0.29
CCDC12-208ENST00000603885 ALOXE3Q9BYJ1 711 aa16.89■□□□□ 0.29
CCDC12-208ENST00000603885 OR51B5Q9H339 312 aa16.89■□□□□ 0.29
CCDC12-208ENST00000603885 TSC22D4Q9Y3Q8 395 aa16.89■□□□□ 0.29
CCDC12-208ENST00000603885 TRGV8A0A0C4DH27 118 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 LRRC14BA6NHZ5 514 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 UGDHO60701 494 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 ZG16O60844 167 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 KRT38O76015 456 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 ZFAND5O76080 213 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 RBP1P09455 135 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 CPN2P22792 545 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 ECHS1P30084 290 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 MAGEA12P43365 314 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 GPR143P51810 404 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 GTF2H2Q13888 395 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 SERTAD2Q14140 314 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 ZRSR2Q15696 482 aaKnown RBP16.88■□□□□ 0.29
CCDC12-208ENST00000603885 KRTCAP3Q53RY4 240 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 OR4C11Q6IEV9 310 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 GTF2H2CQ6P1K8 395 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 GOLGA7Q7Z5G4 137 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.88■□□□□ 0.29
CCDC12-208ENST00000603885 PLD6Q8N2A8 252 aaKnown RBP16.88■□□□□ 0.29
CCDC12-208ENST00000603885 C7orf57Q8NEG2 295 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 OR14A16Q8NHC5 309 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 RGMAQ96B86 450 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 MTERF1Q99551 399 aaKnown RBP16.88■□□□□ 0.29
CCDC12-208ENST00000603885 IPPKQ9H8X2 491 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 DMRT3Q9NQL9 472 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 VTI1BQ9UEU0 232 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 ZNF223Q9UK11 482 aaPredicted RBP16.88■□□□□ 0.29
CCDC12-208ENST00000603885 TMCO1Q9UM00 188 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 NOTCH2Q04721 2471 aa16.88■□□□□ 0.29
CCDC12-208ENST00000603885 A0A087WUV0 522 aaPredicted RBP16.87■□□□□ 0.29
CCDC12-208ENST00000603885 POC1B-GALNT4F8VUJ3 575 aa16.87■□□□□ 0.29
CCDC12-208ENST00000603885 H0YIV9 168 aa16.87■□□□□ 0.29
CCDC12-208ENST00000603885 LDB3O75112 727 aa16.87■□□□□ 0.29
CCDC12-208ENST00000603885 ITGA10O75578 1167 aa16.87■□□□□ 0.29
CCDC12-208ENST00000603885 SIX3O95343 332 aaPredicted RBP16.87■□□□□ 0.29
CCDC12-208ENST00000603885 CNTFP26441 200 aa16.87■□□□□ 0.29
CCDC12-208ENST00000603885 TSNAXIP1Q2TAA8 658 aa16.87■□□□□ 0.29
CCDC12-208ENST00000603885 ZNF227Q86WZ6 799 aa16.87■□□□□ 0.29
CCDC12-208ENST00000603885 CYP4Z2PQ8N1L4 340 aa16.87■□□□□ 0.29
CCDC12-208ENST00000603885 RNF175Q8N4F7 328 aa16.87■□□□□ 0.29
CCDC12-208ENST00000603885 TMEM156Q8N614 296 aa16.87■□□□□ 0.29
CCDC12-208ENST00000603885 PTGR2Q8N8N7 351 aaPredicted RBP16.87■□□□□ 0.29
CCDC12-208ENST00000603885 MORN4Q8NDC4 146 aa16.87■□□□□ 0.29
CCDC12-208ENST00000603885 KIF18AQ8NI77 898 aa16.87■□□□□ 0.29
CCDC12-208ENST00000603885 GPR137Q96N19 417 aa16.87■□□□□ 0.29
CCDC12-208ENST00000603885 TSPAN10Q9H1Z9 355 aaPredicted RBP16.87■□□□□ 0.29
CCDC12-208ENST00000603885 ZNF358Q9NW07 568 aa16.87■□□□□ 0.29
CCDC12-208ENST00000603885 MS4A12Q9NXJ0 267 aa16.87■□□□□ 0.29
CCDC12-208ENST00000603885 SUCOQ9UBS9 1254 aaKnown RBP16.87■□□□□ 0.29
CCDC12-208ENST00000603885 ZNF180Q9UJW8 692 aa16.87■□□□□ 0.29
CCDC12-208ENST00000603885 KLF13Q9Y2Y9 288 aaPredicted RBP16.87■□□□□ 0.29
CCDC12-208ENST00000603885 CROCCQ5TZA2 2017 aa16.87■□□□□ 0.29
CCDC12-208ENST00000603885 MYOCOSA0A1B0GUC4 107 aa16.86■□□□□ 0.29
CCDC12-208ENST00000603885 NPIPA5E9PKD4 350 aa16.86■□□□□ 0.29
CCDC12-208ENST00000603885 SLC19A2O60779 497 aa16.86■□□□□ 0.29
CCDC12-208ENST00000603885 COL6A2P12110 1019 aa16.86■□□□□ 0.29
CCDC12-208ENST00000603885 ZNF24P17028 368 aa16.86■□□□□ 0.29
CCDC12-208ENST00000603885 TNNI3P19429 210 aa16.86■□□□□ 0.29
CCDC12-208ENST00000603885 PTX3P26022 381 aaPredicted RBP16.86■□□□□ 0.29
CCDC12-208ENST00000603885 COL8A1P27658 744 aa16.86■□□□□ 0.29
CCDC12-208ENST00000603885 CA7P43166 264 aa16.86■□□□□ 0.29
CCDC12-208ENST00000603885 SSR4P51571 173 aa16.86■□□□□ 0.29
CCDC12-208ENST00000603885 ARFIP1P53367 373 aa16.86■□□□□ 0.29
CCDC12-208ENST00000603885 CASP6P55212 293 aa16.86■□□□□ 0.29
CCDC12-208ENST00000603885 RPS13P62277 151 aaKnown RBP16.86■□□□□ 0.29
CCDC12-208ENST00000603885 SLAMF1Q13291 335 aa16.86■□□□□ 0.29
CCDC12-208ENST00000603885 CPSF6Q16630 551 aaKnown RBP eCLIP16.86■□□□□ 0.29
CCDC12-208ENST00000603885 HSDL2Q6YN16 418 aa16.86■□□□□ 0.29
CCDC12-208ENST00000603885 UHMK1Q8TAS1 419 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms