RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 KLF11O14901 512 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 ITM2AO43736 263 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 TMPRSS11DO60235 418 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 CTNSO60931 367 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 GUCY1B2O75343 617 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 CDC123O75794 336 aaPredicted RBP13.05□□□□□ -0.32
RNF40-212ENST00000602784 RSL1D1O76021 490 aaKnown RBP13.05□□□□□ -0.32
RNF40-212ENST00000602784 KLK1P06870 262 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 TPP2P29144 1249 aaPredicted RBP13.05□□□□□ -0.32
RNF40-212ENST00000602784 TLX1P31314 330 aaPredicted RBP13.05□□□□□ -0.32
RNF40-212ENST00000602784 TRA2BP62995 288 aaKnown RBP13.05□□□□□ -0.32
RNF40-212ENST00000602784 HMGCS1Q01581 520 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 BST1Q10588 318 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 DCAF10Q5QP82 559 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 CCNYL2Q5T2Q4 361 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 ATG16L1Q676U5 607 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 NDUFAF7Q7L592 441 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 SCUBE1Q8IWY4 988 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 C1orf52Q8N6N3 182 aaKnown RBP13.05□□□□□ -0.32
RNF40-212ENST00000602784 FAM76AQ8TAV0 307 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 TTC9Q92623 222 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 TANKQ92844 425 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 WBP1Q96G27 269 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 PTCHD1Q96NR3 888 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 RBCK1Q9BYM8 510 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 ZNF700Q9H0M5 742 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 TUBB1Q9H4B7 451 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 PFDN4Q9NQP4 134 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 ATG4BQ9Y4P1 393 aa13.05□□□□□ -0.32
RNF40-212ENST00000602784 A0A1W2PR48 441 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 OR2W5A6NFC9 320 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 ERVH48-1M5A8F1 160 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 RGS14O43566 566 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 SNNO75324 88 aaPredicted RBP13.04□□□□□ -0.32
RNF40-212ENST00000602784 LYPLA1O75608 230 aaPredicted RBP13.04□□□□□ -0.32
RNF40-212ENST00000602784 HPP00738 406 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 CPN2P22792 545 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 PPP2R1BP30154 601 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 BUD31P41223 144 aaPredicted RBP13.04□□□□□ -0.32
RNF40-212ENST00000602784 GSTM5P46439 218 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 MAPK12P53778 367 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 HNRNPH2P55795 449 aaKnown RBP13.04□□□□□ -0.32
RNF40-212ENST00000602784 SOX8P57073 446 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 PPP2R2AP63151 447 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 BTG2P78543 158 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 TNFRSF17Q02223 184 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 ACSM2AQ08AH3 577 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 BIKQ13323 160 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 IMPG1Q17R60 797 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 SPDYAQ5MJ70 313 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 FAM219BQ5XKK7 198 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 ACSM2BQ68CK6 577 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 SCIMPQ6UWF3 145 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 CPEB2Q7Z5Q1 589 aaKnown RBP13.04□□□□□ -0.32
RNF40-212ENST00000602784 ANKRD37Q7Z713 158 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 FAM47BQ8NA70 645 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 TWIST2Q8WVJ9 160 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 CSF3RQ99062 836 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 SORT1Q99523 831 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 C20orf27Q9GZN8 174 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 ING2Q9H160 280 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 RPF2Q9H7B2 306 aaKnown RBP13.04□□□□□ -0.32
RNF40-212ENST00000602784 MANSC1Q9H8J5 431 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 ZNF395Q9H8N7 513 aaPredicted RBP13.04□□□□□ -0.32
RNF40-212ENST00000602784 ATP13A2Q9NQ11 1180 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 PRTFDC1Q9NRG1 225 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 THAP1Q9NVV9 213 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 MCM8Q9UJA3 840 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 FBXL4Q9UKA2 621 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 FBXW2Q9UKT8 454 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 LHX6Q9UPM6 363 aa13.04□□□□□ -0.32
RNF40-212ENST00000602784 IGHV1-45A0A0A0MS14 117 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 TCRBV16S1A1N1A0A5B0 115 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 TMEM233B4DJY2 109 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 GBAP04062 536 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 COX6A1P12074 109 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 ICAM2P13598 275 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 MAOAP21397 527 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 RPL14P50914 215 aaKnown RBP13.03□□□□□ -0.32
RNF40-212ENST00000602784 HNRNPFP52597 415 aaKnown RBP13.03□□□□□ -0.32
RNF40-212ENST00000602784 AIMP2Q13155 320 aaKnown RBP13.03□□□□□ -0.32
RNF40-212ENST00000602784 SLC13A2Q13183 592 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 FAAH2Q6GMR7 532 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 Q6ZSR9 355 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 EFCAB3Q8N7B9 438 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 ZNF781Q8N8C0 355 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 CLEC1AQ8NC01 280 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 TMEM52Q8NDY8 209 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 EXTL1Q92935 676 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 TSLPQ969D9 159 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 C8orf44Q96CB5 159 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 TM4SF18Q96CE8 201 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 APIPQ96GX9 242 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 IMMP1LQ96LU5 166 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 TUBB6Q9BUF5 446 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 ADNPQ9H2P0 1102 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 WDR41Q9HAD4 459 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 MED4Q9NPJ6 270 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 NECTIN3Q9NQS3 549 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 RIC8BQ9NVN3 520 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 1009.1 ms