RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 MRPS22P82650 360 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-224ENST00000600718 DEFB134Q4QY38 66 aa16.72■□□□□ 0.27
SHKBP1-224ENST00000600718 Q8N9G6 341 aaPredicted RBP16.72■□□□□ 0.27
SHKBP1-224ENST00000600718 ZFP90Q8TF47 636 aa16.72■□□□□ 0.27
SHKBP1-224ENST00000600718 EXOSC8Q96B26 276 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-224ENST00000600718 ZBED6CLQ96FA7 236 aaPredicted RBP16.72■□□□□ 0.27
SHKBP1-224ENST00000600718 DUS3LQ96G46 650 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-224ENST00000600718 SH3GL3Q99963 347 aa16.72■□□□□ 0.27
SHKBP1-224ENST00000600718 MAPKAP1Q9BPZ7 522 aa16.72■□□□□ 0.27
SHKBP1-224ENST00000600718 ACSS1Q9NUB1 689 aaPredicted RBP16.72■□□□□ 0.27
SHKBP1-224ENST00000600718 STOML1Q9UBI4 398 aa16.72■□□□□ 0.27
SHKBP1-224ENST00000600718 PLCL2Q9UPR0 1127 aa16.72■□□□□ 0.27
SHKBP1-224ENST00000600718 USP22Q9UPT9 525 aa16.72■□□□□ 0.27
SHKBP1-224ENST00000600718 MDC1Q14676 2089 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-224ENST00000600718 KNL1Q8NG31 2342 aa16.72■□□□□ 0.27
SHKBP1-224ENST00000600718 IGHV5-51A0A0C4DH38 117 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 ELOVL7A1L3X0 281 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 PATE3B3GLJ2 98 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 HCRTR1O43613 425 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 ZBTB11O95625 1053 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 AIFM1O95831 613 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 C9P02748 559 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 ABCB1P08183 1280 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 MYF5P13349 255 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 ATP6V1B2P21281 511 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 CD1CP29017 333 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 MLLT3P42568 568 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 MANFP55145 182 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 MAP7Q14244 749 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 MLC1Q15049 377 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 GLYATQ6IB77 296 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 SERPINA11Q86U17 422 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 SPPL2CQ8IUH8 684 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 SLC35C2Q9NQQ7 365 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 DNAAF2Q9NVR5 837 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 MS4A12Q9NXJ0 267 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 KCMF1Q9P0J7 381 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 UTS2RQ9UKP6 389 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 GSTA4O15217 222 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 BAG2O95816 211 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 GGT1P19440 569 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 PRTGQ2VWP7 1150 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 DEFB110Q30KQ9 67 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 AMZ1Q400G9 498 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 WDR74Q6RFH5 385 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 MICU2Q8IYU8 434 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 UCN3Q969E3 161 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 CCDC74AQ96AQ1 378 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 REXO5Q96IC2 774 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 LOXL4Q96JB6 756 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 LYRM4Q9HD34 91 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 PRDM9Q9NQV7 894 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 SOHLH2Q9NX45 425 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 PSME2Q9UL46 239 aa16.71■□□□□ 0.27
SHKBP1-224ENST00000600718 H3BNX3 289 aa16.7■□□□□ 0.26
SHKBP1-224ENST00000600718 PGRMC2O15173 223 aa16.7■□□□□ 0.26
SHKBP1-224ENST00000600718 SIGLEC6O43699 453 aa16.7■□□□□ 0.26
SHKBP1-224ENST00000600718 BUD31P41223 144 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-224ENST00000600718 GABRA4P48169 554 aa16.7■□□□□ 0.26
SHKBP1-224ENST00000600718 SNRPNP63162 240 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-224ENST00000600718 RUNX2Q13950 521 aa16.7■□□□□ 0.26
SHKBP1-224ENST00000600718 C18orf63Q68DL7 685 aa16.7■□□□□ 0.26
SHKBP1-224ENST00000600718 SLC48A1Q6P1K1 146 aa16.7■□□□□ 0.26
SHKBP1-224ENST00000600718 GPR155Q7Z3F1 870 aa16.7■□□□□ 0.26
SHKBP1-224ENST00000600718 ZNF285Q96NJ3 590 aa16.7■□□□□ 0.26
SHKBP1-224ENST00000600718 SLC35A5Q9BS91 424 aa16.7■□□□□ 0.26
SHKBP1-224ENST00000600718 SPATA9Q9BWV2 254 aa16.7■□□□□ 0.26
SHKBP1-224ENST00000600718 SEMA5BQ9P283 1151 aa16.7■□□□□ 0.26
SHKBP1-224ENST00000600718 C5AR2Q9P296 337 aa16.7■□□□□ 0.26
SHKBP1-224ENST00000600718 CES1P1Q9UKY3 287 aa16.7■□□□□ 0.26
SHKBP1-224ENST00000600718 DAPP1Q9UN19 280 aa16.7■□□□□ 0.26
SHKBP1-224ENST00000600718 MRPS2Q9Y399 296 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-224ENST00000600718 GALR3O60755 368 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 LINGO3P0C6S8 592 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 NR2F6P10588 404 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 NCK1P16333 377 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 IL1RNP18510 177 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 UQCRC2P22695 453 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 CPN2P22792 545 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 SLC7A1P30825 629 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 TLX1P31314 330 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 LIM2P55344 173 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 MRPS35P82673 323 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 CFHR1Q03591 330 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 GAB1Q13480 694 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 SQSTM1Q13501 440 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 NDUFA9Q16795 377 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 SPRED1Q7Z699 444 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 ARHGEF39Q8N4T4 335 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 DTWD1Q8N5C7 304 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 NPLQ9BXD5 320 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 GORASP2Q9H8Y8 452 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 NEUROD4Q9HD90 331 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 SLAMF7Q9NQ25 335 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 STARD5Q9NSY2 213 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 KLHL3Q9UH77 587 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 MN1Q10571 1320 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 GLOD5A6NK44 160 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 AHCYL1O43865 530 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 PCDHGA12O60330 932 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms