RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 CCT7Q99832 543 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 WDR77Q9BQA1 342 aaPredicted RBP13.73□□□□□ -0.21
LTBP4-228ENST00000600499 C20orf27Q9GZN8 174 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 ZNF700Q9H0M5 742 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 ADNPQ9H2P0 1102 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 TUBB1Q9H4B7 451 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 C19orf25Q9UFG5 118 aaPredicted RBP13.73□□□□□ -0.21
LTBP4-228ENST00000600499 ZDHHC2Q9UIJ5 367 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 MCM8Q9UJA3 840 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 ATG4BQ9Y4P1 393 aa13.73□□□□□ -0.21
LTBP4-228ENST00000600499 WDR91A4D1P6 747 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 SLC28A1O00337 649 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 CLDN4O14493 209 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 ITM2AO43736 263 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 SNNO75324 88 aaPredicted RBP13.72□□□□□ -0.21
LTBP4-228ENST00000600499 FAM58BPP0C7Q3 252 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 ATXN8OSP0DMR3 200 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 BGNP21810 368 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 GSTM5P46439 218 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 HNRNPFP52597 415 aaKnown RBP13.72□□□□□ -0.21
LTBP4-228ENST00000600499 RAE1P78406 368 aaKnown RBP13.72□□□□□ -0.21
LTBP4-228ENST00000600499 BTG2P78543 158 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 TNFRSF17Q02223 184 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 BIKQ13323 160 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 KIAA0040Q15053 153 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 NSDHLQ15738 373 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 MINDY4Q4G0A6 757 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 CPEB2Q7Z5Q1 589 aaKnown RBP13.72□□□□□ -0.21
LTBP4-228ENST00000600499 GOLGA6L1Q8N7Z2 621 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 METTL21AQ8WXB1 218 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 EXTL1Q92935 676 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 FCRL1Q96LA6 429 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 MESP1Q9BRJ9 268 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 SHCBP1LQ9BZQ2 653 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 ING2Q9H160 280 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 ACBD3Q9H3P7 528 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 MLXIPLQ9NP71 852 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 FBXL4Q9UKA2 621 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 RAP2CQ9Y3L5 183 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 SPACA6W5XKT8 324 aa13.72□□□□□ -0.21
LTBP4-228ENST00000600499 BSNQ9UPA5 3926 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 SCN2AQ99250 2005 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 A0A1W2PR48 441 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 OR2W5A6NFC9 320 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 ARGFXA6NJG6 315 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 TGFBR3LH3BV60 316 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 B4GALT2O60909 372 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 CRCPO75575 148 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 CDC123O75794 336 aaPredicted RBP13.71□□□□□ -0.21
LTBP4-228ENST00000600499 CHEK2O96017 543 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 KLK1P06870 262 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 NEFHP12036 1026 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 CPN2P22792 545 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 TLX1P31314 330 aaPredicted RBP13.71□□□□□ -0.21
LTBP4-228ENST00000600499 SLC1A6P48664 564 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 HMGCS1Q01581 520 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 BST1Q10588 318 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 AIMP2Q13155 320 aaKnown RBP13.71□□□□□ -0.21
LTBP4-228ENST00000600499 STX3Q13277 289 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 TERF2Q15554 542 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 XKR7Q5GH72 579 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 SH2D4BQ5SQS7 431 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 CYP20A1Q6UW02 462 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 LANCL3Q6ZV70 420 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 TRIM42Q8IWZ5 723 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 C1orf52Q8N6N3 182 aaKnown RBP13.71□□□□□ -0.21
LTBP4-228ENST00000600499 PPP1R14CQ8TAE6 165 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.71□□□□□ -0.21
LTBP4-228ENST00000600499 TANKQ92844 425 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 TSLPQ969D9 159 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 APIPQ96GX9 242 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 PTCHD1Q96NR3 888 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 UBL7Q96S82 380 aaPredicted RBP13.71□□□□□ -0.21
LTBP4-228ENST00000600499 TUBB6Q9BUF5 446 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 RBCK1Q9BYM8 510 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 TRIM55Q9BYV6 548 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 ILKAPQ9H0C8 392 aaPredicted RBP13.71□□□□□ -0.21
LTBP4-228ENST00000600499 ATP13A2Q9NQ11 1180 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 NECTIN3Q9NQS3 549 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 PRTFDC1Q9NRG1 225 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 RIC8BQ9NVN3 520 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 THAP1Q9NVV9 213 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 FBXW2Q9UKT8 454 aa13.71□□□□□ -0.21
LTBP4-228ENST00000600499 PPIEQ9UNP9 301 aaKnown RBP13.71□□□□□ -0.21
LTBP4-228ENST00000600499 WBP11Q9Y2W2 641 aaKnown RBP13.71□□□□□ -0.21
LTBP4-228ENST00000600499 PCDHGA9Q9Y5G4 932 aaKnown RBP13.71□□□□□ -0.21
LTBP4-228ENST00000600499 TMEM233B4DJY2 109 aa13.7□□□□□ -0.22
LTBP4-228ENST00000600499 ATXN7O15265 892 aaPredicted RBP13.7□□□□□ -0.22
LTBP4-228ENST00000600499 RGS14O43566 566 aa13.7□□□□□ -0.22
LTBP4-228ENST00000600499 GUCY1B2O75343 617 aa13.7□□□□□ -0.22
LTBP4-228ENST00000600499 LYPLA1O75608 230 aaPredicted RBP13.7□□□□□ -0.22
LTBP4-228ENST00000600499 ICAM2P13598 275 aa13.7□□□□□ -0.22
LTBP4-228ENST00000600499 TIA1P31483 386 aaKnown RBP eCLIP13.7□□□□□ -0.22
LTBP4-228ENST00000600499 BUD31P41223 144 aaPredicted RBP13.7□□□□□ -0.22
LTBP4-228ENST00000600499 POLE2P56282 527 aa13.7□□□□□ -0.22
LTBP4-228ENST00000600499 PPP2R2AP63151 447 aa13.7□□□□□ -0.22
LTBP4-228ENST00000600499 ACSM2AQ08AH3 577 aa13.7□□□□□ -0.22
LTBP4-228ENST00000600499 CCNYL2Q5T2Q4 361 aa13.7□□□□□ -0.22
LTBP4-228ENST00000600499 CPZQ66K79 652 aa13.7□□□□□ -0.22
LTBP4-228ENST00000600499 ACSM2BQ68CK6 577 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms