RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 NRDCO43847 1150 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 HCN1O60741 890 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 ATP6AP2O75787 350 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 ATE1O95260 518 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 ETHE1O95571 254 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 GUCA1CO95843 209 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 CCDC175P0C221 793 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 C1GALT1C1LP0DN25 315 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 DNASE1P24855 282 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 CXCR5P32302 372 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 PIGAP37287 484 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 DNASE1L1P49184 302 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 RAB38P57729 211 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 PPP2R2AP63151 447 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 RNF4P78317 190 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 CCZ1BP86790 482 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 CCZ1P86791 482 aaPredicted RBP5.64□□□□□ -1.51
VRK3-220ENST00000600259 PLGLB1Q02325 96 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 CRYMQ14894 314 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 RBBP5Q15291 538 aaKnown RBP5.64□□□□□ -1.51
VRK3-220ENST00000600259 ELAVL1Q15717 326 aaKnown RBP5.64□□□□□ -1.51
VRK3-220ENST00000600259 CYP1B1Q16678 543 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 MPEG1Q2M385 716 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 C18orf21Q32NC0 220 aaPredicted RBP5.64□□□□□ -1.51
VRK3-220ENST00000600259 MSS51Q4VC12 460 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 C1orf185Q5T7R7 199 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 TEDDM1Q5T9Z0 273 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 ABHD17CQ6PCB6 329 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 HSDL2Q6YN16 418 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 RTL4Q6ZR62 310 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 ZNF662Q6ZS27 426 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 GK5Q6ZS86 529 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 CAMKMTQ7Z624 323 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 UBE3DQ7Z6J8 389 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 GALNT7Q86SF2 657 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 PRIMA1Q86XR5 153 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 PALM2Q8IXS6 379 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.64□□□□□ -1.51
VRK3-220ENST00000600259 ULK2Q8IYT8 1036 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 MYO1HQ8N1T3 1032 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 LRRC25Q8N386 305 aaPredicted RBP5.64□□□□□ -1.51
VRK3-220ENST00000600259 TXLNBQ8N3L3 684 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 TMEM132CQ8N3T6 1108 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 TBC1D19Q8N5T2 526 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 MORN4Q8NDC4 146 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 WFDC11Q8NEX6 87 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 ZNF721Q8TF20 911 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 FAM222BQ8WU58 562 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 SREK1Q8WXA9 508 aaKnown RBP5.64□□□□□ -1.51
VRK3-220ENST00000600259 ATL1Q8WXF7 558 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 ASB15Q8WXK1 588 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 ANKRD7Q92527 254 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 GAL3ST3Q96A11 431 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 ANKRD9Q96BM1 317 aaPredicted RBP5.64□□□□□ -1.51
VRK3-220ENST00000600259 PWWP2AQ96N64 755 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 CSF3RQ99062 836 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 AIF1LQ9BQI0 150 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 FAM167BQ9BTA0 163 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 ALOXE3Q9BYJ1 711 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 NT5DC2Q9H857 520 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 ACKR4Q9NPB9 350 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 DMRT3Q9NQL9 472 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 HOMER3Q9NSC5 361 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 SLC17A6Q9P2U8 582 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 ACAD8Q9UKU7 415 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 ZNF490Q9ULM2 529 aaPredicted RBP5.64□□□□□ -1.51
VRK3-220ENST00000600259 DAPP1Q9UN19 280 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 TRGV5A0A0B4J1U4 118 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 LRRC3CA6NJW4 275 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 ACOT7O00154 380 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 CDC7O00311 574 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 CLDN4O14493 209 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 TAPBPO15533 448 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 ERI3O43414 337 aaKnown RBP5.63□□□□□ -1.51
VRK3-220ENST00000600259 BANF1O75531 89 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 CLEC3AO75596 197 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 EPPINO95925 133 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 IGKV3-11P04433 115 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 ENO2P09104 434 aaPredicted RBP5.63□□□□□ -1.51
VRK3-220ENST00000600259 EPXP11678 715 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 GABRA1P14867 456 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 CD53P19397 219 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 IVDP26440 423 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 GDF5P43026 501 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 SLC6A12P48065 614 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 MAN2A2P49641 1150 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 LIM2P55344 173 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 STXBP1P61764 594 aaKnown RBP5.63□□□□□ -1.51
VRK3-220ENST00000600259 IGLV3-21P80748 117 aaPredicted RBP5.63□□□□□ -1.51
VRK3-220ENST00000600259 CDKL1Q00532 357 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 SLC13A2Q13183 592 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 BMPR2Q13873 1038 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 DEFB113Q30KQ7 82 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 FLYWCH1Q4VC44 716 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 WLSQ5T9L3 541 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 RNASEH2BQ5TBB1 312 aaKnown RBP5.63□□□□□ -1.51
VRK3-220ENST00000600259 ADNP2Q6IQ32 1131 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 PAMR1Q6UXH9 720 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 TMIGD1Q6UXZ0 262 aa5.63□□□□□ -1.51
VRK3-220ENST00000600259 DGAT2L6Q6ZPD8 337 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms