RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 CPAMD8Q8IZJ3 1885 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 CCT8L1PA6NM43 557 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 E7ENX8 843 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 ITM2AO43736 263 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 DNAJB6O75190 326 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 CRCPO75575 148 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 KIR3DL1P43629 444 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 PNLIPRP1P54315 467 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 AQP5P55064 265 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 AP1S2P56377 157 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 TAP2Q03519 686 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 ZXDCQ2QGD7 858 aaPredicted RBP12.89□□□□□ -0.35
IRF3-225ENST00000600022 ARL13AQ5H913 290 aaPredicted RBP12.89□□□□□ -0.35
IRF3-225ENST00000600022 ZNF678Q5SXM1 525 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 ABHD17BQ5VST6 288 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 CES4AQ5XG92 561 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 BNC2Q6ZN30 1099 aaPredicted RBP12.89□□□□□ -0.35
IRF3-225ENST00000600022 RIPOR1Q6ZS17 1223 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 FRMD7Q6ZUT3 714 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 TRPM8Q7Z2W7 1104 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 VN1R4Q7Z5H5 301 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 BEST3Q8N1M1 668 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 TCAIMQ8N3R3 496 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 RAB42Q8N4Z0 105 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 FBXO15Q8NCQ5 510 aaPredicted RBP12.89□□□□□ -0.35
IRF3-225ENST00000600022 C10orf82Q8WW14 230 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 MOCOSQ96EN8 888 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 C1QTNF3Q9BXJ4 246 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 TRIM8Q9BZR9 551 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 PFDN4Q9NQP4 134 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 KLHL1Q9NR64 748 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 RIC8BQ9NVN3 520 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 ITGB1BP2Q9UKP3 347 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 SH2B3Q9UQQ2 575 aa12.89□□□□□ -0.35
IRF3-225ENST00000600022 KLF2Q9Y5W3 355 aaPredicted RBP12.89□□□□□ -0.35
IRF3-225ENST00000600022 C2CD3Q4AC94 2353 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 NCF1BA6NI72 391 aaPredicted RBP12.88□□□□□ -0.35
IRF3-225ENST00000600022 TRPC5OSA6NMA1 111 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 NCF1CA8MVU1 366 aaPredicted RBP12.88□□□□□ -0.35
IRF3-225ENST00000600022 SLC19A2O60779 497 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 CCDC22O60826 627 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 MLYCDO95822 493 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 CATP04040 527 aaKnown RBP12.88□□□□□ -0.35
IRF3-225ENST00000600022 RPS17P08708 135 aaKnown RBP12.88□□□□□ -0.35
IRF3-225ENST00000600022 ANXA5P08758 320 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 C8orf89P0DMQ9 161 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 NCF1P14598 390 aaPredicted RBP12.88□□□□□ -0.35
IRF3-225ENST00000600022 EEF1DP29692 281 aaKnown RBP12.88□□□□□ -0.35
IRF3-225ENST00000600022 CD96P40200 585 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 PIK3CGP48736 1102 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 ZNF766Q5HY98 468 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 SPINK14Q6IE38 97 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 SULT1C3Q6IMI6 304 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 METTL2BQ6P1Q9 378 aaKnown RBP12.88□□□□□ -0.35
IRF3-225ENST00000600022 UBE2R2Q712K3 238 aaPredicted RBP12.88□□□□□ -0.35
IRF3-225ENST00000600022 ADCK2Q7Z695 626 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 YTHDF3Q7Z739 585 aaKnown RBP12.88□□□□□ -0.35
IRF3-225ENST00000600022 ZNF808Q8N4W9 903 aaPredicted RBP12.88□□□□□ -0.35
IRF3-225ENST00000600022 ZNF781Q8N8C0 355 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 DNAJB8Q8NHS0 232 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 RFWD2Q8NHY2 731 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 MAGEC3Q8TD91 643 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 MCOLN3Q8TDD5 553 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 MVB12AQ96EY5 273 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 SORT1Q99523 831 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 RNF32Q9H0A6 362 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 PARVBQ9HBI1 364 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 C14orf105Q9NVL8 296 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 WWOXQ9NZC7 414 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 HCN3Q9P1Z3 774 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 PDE10AQ9Y233 779 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 ANGPTL3Q9Y5C1 460 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 SCN3AQ9NY46 2000 aa12.88□□□□□ -0.35
IRF3-225ENST00000600022 FAM227AF5H4B4 570 aa12.87□□□□□ -0.35
IRF3-225ENST00000600022 SGK494L7N484 410 aa12.87□□□□□ -0.35
IRF3-225ENST00000600022 HDAC3O15379 428 aa12.87□□□□□ -0.35
IRF3-225ENST00000600022 CRYABP02511 175 aaKnown RBP12.87□□□□□ -0.35
IRF3-225ENST00000600022 LCP2Q13094 533 aa12.87□□□□□ -0.35
IRF3-225ENST00000600022 TUBA3CQ13748 450 aa12.87□□□□□ -0.35
IRF3-225ENST00000600022 INAQ16352 499 aa12.87□□□□□ -0.35
IRF3-225ENST00000600022 BTBD16Q32M84 506 aa12.87□□□□□ -0.35
IRF3-225ENST00000600022 MINDY4Q4G0A6 757 aa12.87□□□□□ -0.35
IRF3-225ENST00000600022 ACER2Q5QJU3 275 aa12.87□□□□□ -0.35
IRF3-225ENST00000600022 SH2D4BQ5SQS7 431 aa12.87□□□□□ -0.35
IRF3-225ENST00000600022 GARNL3Q5VVW2 1013 aa12.87□□□□□ -0.35
IRF3-225ENST00000600022 H3F3CQ6NXT2 135 aa12.87□□□□□ -0.35
IRF3-225ENST00000600022 TUBA3EQ6PEY2 450 aa12.87□□□□□ -0.35
IRF3-225ENST00000600022 ACAD11Q709F0 780 aa12.87□□□□□ -0.35
IRF3-225ENST00000600022 CPEB2Q7Z5Q1 589 aaKnown RBP12.87□□□□□ -0.35
IRF3-225ENST00000600022 PDSS2Q86YH6 399 aa12.87□□□□□ -0.35
IRF3-225ENST00000600022 OR51Q1Q8NH59 317 aa12.87□□□□□ -0.35
IRF3-225ENST00000600022 RERGQ96A58 199 aaPredicted RBP12.87□□□□□ -0.35
IRF3-225ENST00000600022 RHBDF1Q96CC6 855 aa12.87□□□□□ -0.35
IRF3-225ENST00000600022 TUBB6Q9BUF5 446 aa12.87□□□□□ -0.35
IRF3-225ENST00000600022 C20orf27Q9GZN8 174 aa12.87□□□□□ -0.35
IRF3-225ENST00000600022 ZNF395Q9H8N7 513 aaPredicted RBP12.87□□□□□ -0.35
IRF3-225ENST00000600022 PNPOQ9NVS9 261 aa12.87□□□□□ -0.35
IRF3-225ENST00000600022 UTP6Q9NYH9 597 aaKnown RBP12.87□□□□□ -0.35
IRF3-225ENST00000600022 SUCOQ9UBS9 1254 aaKnown RBP12.87□□□□□ -0.35
IRF3-225ENST00000600022 ZFP69BQ9UJL9 534 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms