RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 ZBTB26Q9HCK0 441 aa13.07□□□□□ -0.32
SHKBP1-218ENST00000598907 KCNJ16Q9NPI9 418 aa13.07□□□□□ -0.32
SHKBP1-218ENST00000598907 CUTCQ9NTM9 273 aa13.07□□□□□ -0.32
SHKBP1-218ENST00000598907 HEATR5BQ9P2D3 2071 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 NPHS1O60500 1241 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 H2AFYO75367 372 aaKnown RBP13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 TOXO94900 526 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 CHRM5P08912 532 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 HOXD4P09016 255 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 EPORP19235 508 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 BGNP21810 368 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 SERPINB5P36952 375 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 MDH1P40925 334 aaKnown RBP13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 GCGRP47871 477 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 E2F2Q14209 437 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 KIR2DS3Q14952 304 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 CHI3L2Q15782 390 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 CAPN13Q6MZZ7 669 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 SUSD1Q6UWL2 747 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 LCTLQ6UWM7 567 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 RGS9BPQ6ZS82 235 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 TRIM42Q8IWZ5 723 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 ZZZ3Q8IYH5 903 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 EID3Q8N140 333 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 MARVELD2Q8N4S9 558 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 DNAJC22Q8N4W6 341 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 OR2A1Q8NGT9 310 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 STT3BQ8TCJ2 826 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 ZNF75CPQ92670 426 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 MIEF2Q96C03 454 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 MIPEPQ99797 713 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 CLEC4MQ9H2X3 399 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 CCDC134Q9H6E4 229 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 CCDC177Q9NQR7 707 aaPredicted RBP13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 ANKRD10Q9NXR5 420 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 OPTCQ9UBM4 332 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 RNF6Q9Y252 685 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 SLC22A14Q9Y267 594 aa13.06□□□□□ -0.32
SHKBP1-218ENST00000598907 ATRQ13535 2644 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 VSTM2BA6NLU5 285 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 TMEM114B3SHH9 223 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 ASNA1O43681 348 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 CCNT2O60583 730 aaKnown RBP13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 SNNO75324 88 aaPredicted RBP13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 CTAG2O75638 210 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 SUPT7LO94864 414 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 WDR47O94967 919 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 LY6G6DO95868 133 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 SERPINE1P05121 402 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 GRK2P25098 689 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 CHRNB4P30926 498 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 ARRB2P32121 409 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 OCA2Q04671 838 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 CLCQ05315 142 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 GALNT1Q10472 559 aaPredicted RBP13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 GTF2H2Q13888 395 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 FCRLBQ6BAA4 426 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 GTF2H2CQ6P1K8 395 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 ZCCHC23Q6ZST2 131 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 FRMD7Q6ZUT3 714 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 RPS27LQ71UM5 84 aaKnown RBP13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 GOLGA7Q7Z5G4 137 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 CD163Q86VB7 1156 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 CCDC71Q8IV32 467 aaPredicted RBP13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 GHDCQ8N2G8 530 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 C2orf73Q8N5S3 287 aaPredicted RBP13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 ASB5Q8WWX0 329 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 SREK1Q8WXA9 508 aaKnown RBP13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 MAGEB18Q96M61 343 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 FRMD6Q96NE9 622 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 NSUN5Q96P11 429 aaKnown RBP13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 TRMOQ9BU70 441 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 DRC3Q9H069 523 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 PCBD2Q9H0N5 130 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 MANSC1Q9H8J5 431 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 ZNF395Q9H8N7 513 aaPredicted RBP13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 DNAJC11Q9NVH1 559 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 GPRC5BQ9NZH0 403 aa13.05□□□□□ -0.32
SHKBP1-218ENST00000598907 IGHV1-45A0A0A0MS14 117 aa13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 A8MUI8 341 aa13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 ISM1B1AKI9 464 aa13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 PPP6CO00743 305 aa13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 OR7A17O14581 309 aa13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 FFAR3O14843 346 aa13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 GPR42O15529 346 aa13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 PRAMEF4O60810 478 aa13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 TPOP07202 933 aa13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 ZGLP1P0C6A0 271 aa13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 EPB42P16452 691 aa13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 MAGP20916 626 aa13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 CXCR2P25025 360 aa13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 CASP2P42575 452 aa13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 PIK3CGP48736 1102 aa13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 GYS2P54840 703 aa13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 CDH13P55290 713 aa13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 GUCY1A3Q02108 690 aa13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 PRDX1Q06830 199 aaKnown RBP13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 BST1Q10588 318 aa13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 RCN2Q14257 317 aa13.04□□□□□ -0.32
SHKBP1-218ENST00000598907 PRAMEF9Q5VWM5 478 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms