RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 ZNHIT1O43257 154 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 ZG16O60844 167 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 NEURL1O76050 574 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 ACSL3O95573 720 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 TGFB1P01137 390 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 ALDOAP04075 364 aaKnown RBP12.85□□□□□ -0.35
SCAF1-203ENST00000598359 POU3F2P20265 443 aaPredicted RBP12.85□□□□□ -0.35
SCAF1-203ENST00000598359 GSTM2P28161 218 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 DDX39BQ13838 428 aaKnown RBP12.85□□□□□ -0.35
SCAF1-203ENST00000598359 TBCCQ15814 346 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 HIST2H2ACQ16777 129 aaPredicted RBP12.85□□□□□ -0.35
SCAF1-203ENST00000598359 PFKFB4Q16877 469 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 PAGE2BQ5JRK9 111 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 ZNF787Q6DD87 383 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 HIST2H2AA3Q6FI13 130 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 MAMDC2Q7Z304 686 aaPredicted RBP12.85□□□□□ -0.35
SCAF1-203ENST00000598359 APCDD1LQ8NCL9 501 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 ARMC2Q8NEN0 867 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 ZNF473Q8WTR7 871 aaKnown RBP12.85□□□□□ -0.35
SCAF1-203ENST00000598359 ZBTB9Q96C00 473 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 SERINC2Q96SA4 455 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 NPLQ9BXD5 320 aaPredicted RBP12.85□□□□□ -0.35
SCAF1-203ENST00000598359 MS4A8Q9BY19 250 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 DEFB126Q9BYW3 111 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 VPS11Q9H270 941 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 ZNF358Q9NW07 568 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 LRFN1Q9P244 771 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 SEC14L3Q9UDX4 400 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 SH3BGRL2Q9UJC5 107 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 ZNF223Q9UK11 482 aaPredicted RBP12.85□□□□□ -0.35
SCAF1-203ENST00000598359 DAPP1Q9UN19 280 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 MMACHCQ9Y4U1 282 aa12.85□□□□□ -0.35
SCAF1-203ENST00000598359 A0A088AWK7 358 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 PRKNO60260 465 aaPredicted RBP12.84□□□□□ -0.35
SCAF1-203ENST00000598359 CRYABP02511 175 aaKnown RBP12.84□□□□□ -0.35
SCAF1-203ENST00000598359 STSP08842 583 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 GFAPP14136 432 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 ZNF10P21506 573 aaPredicted RBP12.84□□□□□ -0.35
SCAF1-203ENST00000598359 ATP5A1P25705 553 aaKnown RBP12.84□□□□□ -0.35
SCAF1-203ENST00000598359 PHBP35232 272 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 CASP2P42575 452 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 MTTPP55157 894 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 MLF1P58340 268 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 ID2Q02363 134 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 LAPTM5Q13571 262 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 FAM83EQ2M2I3 478 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 MED27Q6P2C8 311 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 C16orf47Q6ZP98 133 aaPredicted RBP12.84□□□□□ -0.35
SCAF1-203ENST00000598359 GALNTL5Q7Z4T8 443 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.84□□□□□ -0.35
SCAF1-203ENST00000598359 ZNF227Q86WZ6 799 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 MYLK4Q86YV6 388 aaPredicted RBP12.84□□□□□ -0.35
SCAF1-203ENST00000598359 PLD6Q8N2A8 252 aaKnown RBP12.84□□□□□ -0.35
SCAF1-203ENST00000598359 B3GNT7Q8NFL0 401 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 OR7G3Q8NG95 312 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 DNAJB8Q8NHS0 232 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 NCLNQ969V3 563 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 SCMH1Q96GD3 660 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 SEC16BQ96JE7 1060 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 GPR78Q96P69 363 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 MAPKAP1Q9BPZ7 522 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 STMN4Q9H169 189 aaPredicted RBP12.84□□□□□ -0.35
SCAF1-203ENST00000598359 OR51B5Q9H339 312 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 ACSS3Q9H6R3 686 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 LIN28AQ9H9Z2 209 aaKnown RBP12.84□□□□□ -0.35
SCAF1-203ENST00000598359 KCMF1Q9P0J7 381 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 CPSF2Q9P2I0 782 aaKnown RBP12.84□□□□□ -0.35
SCAF1-203ENST00000598359 FBXW2Q9UKT8 454 aa12.84□□□□□ -0.35
SCAF1-203ENST00000598359 CLDN4O14493 209 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 LDB3O75112 727 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 SLC25A12O75746 678 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 KLHL2O95198 593 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 SIX3O95343 332 aaPredicted RBP12.83□□□□□ -0.36
SCAF1-203ENST00000598359 IFNA16P05015 189 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 SP1P08047 785 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 CD46P15529 392 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 EPB42P16452 691 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 TYK2P29597 1187 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 EEF1DP29692 281 aaKnown RBP12.83□□□□□ -0.36
SCAF1-203ENST00000598359 SERPINB8P50452 374 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 HSD17B7P56937 341 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 PPP2R2AP63151 447 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 E2F2Q14209 437 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 SETDB1Q15047 1291 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 RASA2Q15283 850 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 MAPKAPK3Q16644 382 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 ZNF595Q8IYB9 648 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 LAS2Q8IYD9 372 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 RIBC1Q8N443 379 aaPredicted RBP12.83□□□□□ -0.36
SCAF1-203ENST00000598359 ZNF321PQ8N8H1 164 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 ACOT4Q8N9L9 421 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 RHEBL1Q8TAI7 183 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 KCNC2Q96PR1 638 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 PHF12Q96QT6 1004 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 MTERF1Q99551 399 aaKnown RBP12.83□□□□□ -0.36
SCAF1-203ENST00000598359 PPCSQ9HAB8 311 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 LGALS13Q9UHV8 139 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 MRPS33Q9Y291 106 aaKnown RBP12.83□□□□□ -0.36
SCAF1-203ENST00000598359 ANGPTL3Q9Y5C1 460 aa12.83□□□□□ -0.36
SCAF1-203ENST00000598359 ZGRF1Q86YA3 2104 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms