RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 EEDO75530 441 aaKnown RBP12.98□□□□□ -0.33
UPF1-205ENST00000598209 SORBS2O94875 1100 aaKnown RBP12.98□□□□□ -0.33
UPF1-205ENST00000598209 SEMA3DO95025 777 aa12.98□□□□□ -0.33
UPF1-205ENST00000598209 PDYNP01213 254 aa12.98□□□□□ -0.33
UPF1-205ENST00000598209 CPA3P15088 417 aa12.98□□□□□ -0.33
UPF1-205ENST00000598209 CPN2P22792 545 aa12.98□□□□□ -0.33
UPF1-205ENST00000598209 LCP2Q13094 533 aa12.98□□□□□ -0.33
UPF1-205ENST00000598209 B3GNTL1Q67FW5 361 aaPredicted RBP12.98□□□□□ -0.33
UPF1-205ENST00000598209 EFCAB3Q8N7B9 438 aa12.98□□□□□ -0.33
UPF1-205ENST00000598209 CDYL2Q8N8U2 506 aa12.98□□□□□ -0.33
UPF1-205ENST00000598209 BANPQ8N9N5 519 aa12.98□□□□□ -0.33
UPF1-205ENST00000598209 IQCGQ9H095 443 aaKnown RBP12.98□□□□□ -0.33
UPF1-205ENST00000598209 DDX31Q9H8H2 851 aaKnown RBP12.98□□□□□ -0.33
UPF1-205ENST00000598209 KCNK13Q9HB14 408 aa12.98□□□□□ -0.33
UPF1-205ENST00000598209 MMP25Q9NPA2 562 aa12.98□□□□□ -0.33
UPF1-205ENST00000598209 PHF11Q9UIL8 331 aa12.98□□□□□ -0.33
UPF1-205ENST00000598209 MID2Q9UJV3 735 aa12.98□□□□□ -0.33
UPF1-205ENST00000598209 B3GNT3Q9Y2A9 372 aa12.98□□□□□ -0.33
UPF1-205ENST00000598209 PLLPQ9Y342 182 aa12.98□□□□□ -0.33
UPF1-205ENST00000598209 CSAG2Q9Y5P2 127 aa12.98□□□□□ -0.33
UPF1-205ENST00000598209 FASNP49327 2511 aaKnown RBP12.98□□□□□ -0.33
UPF1-205ENST00000598209 BLACEA4D250 179 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 TTLL8A6PVC2 850 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 A8MUI8 341 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 PYCARD-AS1I3L0S3 204 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 MANBAO00462 879 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 PPP2R1BP30154 601 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 HMOX2P30519 316 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 NAGLUP54802 743 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 MLLT10P55197 1068 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 PKNOX1P55347 436 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 HNRNPH2P55795 449 aaKnown RBP12.97□□□□□ -0.33
UPF1-205ENST00000598209 DNAJB13P59910 316 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 NAA20P61599 178 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 ZNF844Q08AG5 666 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 KRT71Q3SY84 523 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 PLEKHN1Q494U1 663 aaPredicted RBP12.97□□□□□ -0.33
UPF1-205ENST00000598209 TCHHL1Q5QJ38 904 aaPredicted RBP12.97□□□□□ -0.33
UPF1-205ENST00000598209 MRM1Q6IN84 353 aaKnown RBP12.97□□□□□ -0.33
UPF1-205ENST00000598209 CYP20A1Q6UW02 462 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 Q6ZS92 163 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 GPR180Q86V85 440 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 NUDT13Q86X67 352 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 Q8NA96 180 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 SLC29A3Q9BZD2 475 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 ILKAPQ9H0C8 392 aaPredicted RBP12.97□□□□□ -0.33
UPF1-205ENST00000598209 BRF2Q9HAW0 419 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 SLAMF7Q9NQ25 335 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 PNO1Q9NRX1 252 aaKnown RBP12.97□□□□□ -0.33
UPF1-205ENST00000598209 OXSMQ9NWU1 459 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 LYARQ9NX58 379 aaKnown RBP12.97□□□□□ -0.33
UPF1-205ENST00000598209 MS4A12Q9NXJ0 267 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 AHSPQ9NZD4 102 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 SLC12A4Q9UP95 1085 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 ATG4BQ9Y4P1 393 aa12.97□□□□□ -0.33
UPF1-205ENST00000598209 SHANK1Q9Y566 2161 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 MYOCOSA0A1B0GUC4 107 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 SYNDIG1LA6NDD5 238 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 TMPRSS11DO60235 418 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 LDB3O75112 727 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 SPAG7O75391 227 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 MYO1DO94832 1006 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 ESRRBO95718 433 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 KRT6AP02538 564 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 GBAP04062 536 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 KRT6BP04259 564 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 ENO1P06733 434 aaKnown RBP12.96□□□□□ -0.33
UPF1-205ENST00000598209 FAM58BPP0C7Q3 252 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 TLX1P31314 330 aaPredicted RBP12.96□□□□□ -0.33
UPF1-205ENST00000598209 KRT6CP48668 564 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 TNFRSF17Q02223 184 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 ID2Q02363 134 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 ZNF33BQ06732 778 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 STX4Q12846 297 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 PCLAFQ15004 111 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 CFAP157Q5JU67 520 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 ABHD17BQ5VST6 288 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 LIPMQ5VYY2 423 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 C18orf63Q68DL7 685 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 FCRLBQ6BAA4 426 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 H3F3CQ6NXT2 135 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 FRMD7Q6ZUT3 714 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 C10orf107Q8IVU9 208 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 NFAM1Q8NET5 270 aaPredicted RBP12.96□□□□□ -0.33
UPF1-205ENST00000598209 DNAJB14Q8TBM8 379 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 METTL6Q8TCB7 284 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 AGAP11Q8TF27 550 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 CNDP1Q96KN2 507 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 SMC6Q96SB8 1091 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 HBEGFQ99075 208 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 MRPL1Q9BYD6 325 aaKnown RBP12.96□□□□□ -0.33
UPF1-205ENST00000598209 ALOXE3Q9BYJ1 711 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 RPF2Q9H7B2 306 aaKnown RBP12.96□□□□□ -0.33
UPF1-205ENST00000598209 MID1IP1Q9NPA3 183 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 ADAP2Q9NPF8 381 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 PLA2G3Q9NZ20 509 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 TEKT2Q9UIF3 430 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 ASB4Q9Y574 426 aa12.96□□□□□ -0.33
UPF1-205ENST00000598209 CROCCQ5TZA2 2017 aa12.96□□□□□ -0.34
UPF1-205ENST00000598209 DYTNA2CJ06 578 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms