RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 AKTIPQ9H8T0 292 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 MEAF6Q9HAF1 191 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 KCNK13Q9HB14 408 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 MCM8Q9UJA3 840 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 FBXW2Q9UKT8 454 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 MKL2Q9ULH7 1088 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 MYOCOSA0A1B0GUC4 107 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 C9J4A7 227 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 SLC28A1O00337 649 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 RRP8O43159 456 aaKnown RBP9.93□□□□□ -0.82
LIG1-210ENST00000596332 B4GALT2O60909 372 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 CTNSO60931 367 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 SKAP2O75563 359 aaPredicted RBP9.93□□□□□ -0.82
LIG1-210ENST00000596332 CDC123O75794 336 aaPredicted RBP9.93□□□□□ -0.82
LIG1-210ENST00000596332 AIFM1O95831 613 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 ALOX15P16050 662 aaPredicted RBP9.93□□□□□ -0.82
LIG1-210ENST00000596332 MAOAP21397 527 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 PPP2R1BP30154 601 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 GPR143P51810 404 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 RAP1GDS1P52306 607 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 GYS2P54840 703 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 EMP2P54851 167 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 PHEXP78562 749 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 MC1RQ01726 317 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 DUSP2Q05923 314 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 SLC9B1Q4ZJI4 515 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 FAM71E1Q6IPT2 247 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 NOXRED1Q6NXP6 359 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 DGAT2L6Q6ZPD8 337 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 QSOX2Q6ZRP7 698 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 NUDT13Q86X67 352 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 TRIM42Q8IWZ5 723 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 FAM47BQ8NA70 645 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 OR11G2Q8NGC1 345 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 C16orf78Q8WTQ4 265 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 SREK1Q8WXA9 508 aaKnown RBP9.93□□□□□ -0.82
LIG1-210ENST00000596332 C8orf44Q96CB5 159 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 METTL2AQ96IZ6 378 aaKnown RBP9.93□□□□□ -0.82
LIG1-210ENST00000596332 IMMP1LQ96LU5 166 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 ZNF681Q96N22 645 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 ZNF317Q96PQ6 595 aaPredicted RBP9.93□□□□□ -0.82
LIG1-210ENST00000596332 NUF2Q9BZD4 464 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 LRTM1Q9HBL6 345 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 C14orf105Q9NVL8 296 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 C1orf109Q9NX04 203 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 MARCOQ9UEW3 520 aaPredicted RBP9.93□□□□□ -0.82
LIG1-210ENST00000596332 C3orf18Q9UK00 162 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 NXT1Q9UKK6 140 aaKnown RBP9.93□□□□□ -0.82
LIG1-210ENST00000596332 NBEAQ8NFP9 2946 aa9.93□□□□□ -0.82
LIG1-210ENST00000596332 TCRBV16S1A1N1A0A5B0 115 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 ARHGAP10A1A4S6 786 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 GLOD5A6NK44 160 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 ANKRD28O15084 1053 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 HDAC3O15379 428 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 FGF17O60258 216 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 EDF1O60869 148 aaKnown RBP9.92□□□□□ -0.82
LIG1-210ENST00000596332 LDB3O75112 727 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 PEX11AO75192 247 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 ALOX12BO75342 701 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 SEC22BO75396 215 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 ALDOCP09972 364 aaKnown RBP9.92□□□□□ -0.82
LIG1-210ENST00000596332 KITP10721 976 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 COX6A1P12074 109 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 BCKDHAP12694 445 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 SDC1P18827 310 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 TIA1P31483 386 aaKnown RBP eCLIP9.92□□□□□ -0.82
LIG1-210ENST00000596332 MDH1P40925 334 aaKnown RBP9.92□□□□□ -0.82
LIG1-210ENST00000596332 FOLR3P41439 243 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 HSD17B7P56937 341 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 TRA2BP62995 288 aaKnown RBP9.92□□□□□ -0.82
LIG1-210ENST00000596332 TNFRSF17Q02223 184 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 OCA2Q04671 838 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 TGM3Q08188 693 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 VAC14Q08AM6 782 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 CDC20Q12834 499 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 PCOLCEQ15113 449 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 PDCD2Q16342 344 aaPredicted RBP9.92□□□□□ -0.82
LIG1-210ENST00000596332 MPEG1Q2M385 716 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 ZNF750Q32MQ0 723 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 SPIN4Q56A73 249 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 CCNYL2Q5T2Q4 361 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 NDUFAF5Q5TEU4 345 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 CPZQ66K79 652 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 PCSK4Q6UW60 755 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 EPGNQ6UW88 154 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 CCDC81Q6ZN84 652 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 FAM47EQ6ZV65 393 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 ANKRD37Q7Z713 158 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 MRGPREQ86SM8 312 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 OR4N5Q8IXE1 308 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 ZNF595Q8IYB9 648 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 NFAM1Q8NET5 270 aaPredicted RBP9.92□□□□□ -0.82
LIG1-210ENST00000596332 FAM76AQ8TAV0 307 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 PIWIL2Q8TC59 973 aaKnown RBP9.92□□□□□ -0.82
LIG1-210ENST00000596332 NACC2Q96BF6 587 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 C19orf60Q96EN9 201 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 OR52B2Q96RD2 323 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 CRB3Q9BUF7 120 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 EFHD1Q9BUP0 239 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 YIPF2Q9BWQ6 316 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms