RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 SLC6A19Q695T7 634 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 FCRLBQ6BAA4 426 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 PLAG1Q6DJT9 500 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 TTC19Q6DKK2 380 aaPredicted RBP10.44□□□□□ -0.74
VRK3-210ENST00000596121 H3F3CQ6NXT2 135 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 ATG14Q6ZNE5 492 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 GPRIN3Q6ZVF9 776 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 OR4N5Q8IXE1 308 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 ZNF595Q8IYB9 648 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 CNPY4Q8N129 248 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 ZCCHC7Q8N3Z6 543 aaKnown RBP10.44□□□□□ -0.74
VRK3-210ENST00000596121 CATSPER1Q8NEC5 780 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 MYRIPQ8NFW9 859 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 TCP10LQ8TDR4 215 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 PPP4R1Q8TF05 950 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 AGAP11Q8TF27 550 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 APOPT1Q96IL0 206 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 VPS50Q96JG6 964 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 AGAP4Q96P64 663 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 ZIM3Q96PE6 472 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 FAM111AQ96PZ2 611 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 ROGDIQ9GZN7 287 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 PRM3Q9NNZ6 103 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 C19orf25Q9UFG5 118 aaPredicted RBP10.44□□□□□ -0.74
VRK3-210ENST00000596121 ANAPC2Q9UJX6 822 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 MMACHCQ9Y4U1 282 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 TIMM22Q9Y584 194 aa10.44□□□□□ -0.74
VRK3-210ENST00000596121 HEMK1Q9Y5R4 338 aaPredicted RBP10.44□□□□□ -0.74
VRK3-210ENST00000596121 PRRC2CQ9Y520 2896 aaKnown RBP10.44□□□□□ -0.74
VRK3-210ENST00000596121 A0A088AWK7 358 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 A0A1W2PS29 197 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 PROM1O43490 865 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 TYROBPO43914 113 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 FGF17O60258 216 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 DPM1O60762 260 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 ESRRBO95718 433 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 F10P00742 488 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 ZNF10P21506 573 aaPredicted RBP10.43□□□□□ -0.74
VRK3-210ENST00000596121 SERPINB3P29508 390 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 ALDH3A1P30838 453 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 ARFIP1P53367 373 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 TLE1Q04724 770 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 IFT88Q13099 833 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 SLC13A2Q13183 592 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 MFAP5Q13361 173 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 MPP2Q14168 576 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 IGFBP7Q16270 282 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 KRT71Q3SY84 523 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 TNFAIP8L3Q5GJ75 292 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 CRB2Q5IJ48 1285 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 SCIMPQ6UWF3 145 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 ISLR2Q6UXK2 745 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 DGAT2L6Q6ZPD8 337 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 RIPOR1Q6ZS17 1223 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 Q6ZS92 163 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 FRMD7Q6ZUT3 714 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 CUZD1Q86UP6 607 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 GPR180Q86V85 440 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 EXOC3L1Q86VI1 746 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 METTL4Q8N3J2 472 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 RDH11Q8TC12 318 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 M1APQ8TC57 530 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 METTL6Q8TCB7 284 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 ELP5Q8TE02 316 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 PTPMT1Q8WUK0 201 aaPredicted RBP10.43□□□□□ -0.74
VRK3-210ENST00000596121 SELENOMQ8WWX9 145 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 MAGEB10Q96LZ2 347 aaPredicted RBP10.43□□□□□ -0.74
VRK3-210ENST00000596121 LMF1Q96S06 567 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 SERPINI1Q99574 410 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 LPAR4Q99677 370 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 MECRQ9BV79 373 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 GATA5Q9BWX5 397 aaPredicted RBP10.43□□□□□ -0.74
VRK3-210ENST00000596121 SHCBP1LQ9BZQ2 653 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 ELOVL6Q9H5J4 265 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 MMP25Q9NPA2 562 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 RRAGDQ9NQL2 400 aaPredicted RBP10.43□□□□□ -0.74
VRK3-210ENST00000596121 PNO1Q9NRX1 252 aaKnown RBP10.43□□□□□ -0.74
VRK3-210ENST00000596121 ZNF223Q9UK11 482 aaPredicted RBP10.43□□□□□ -0.74
VRK3-210ENST00000596121 SLC12A4Q9UP95 1085 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 RELNP78509 3460 aa10.43□□□□□ -0.74
VRK3-210ENST00000596121 ARHGAP10A1A4S6 786 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 SAGE2PA6NJ88 616 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 GLOD5A6NK44 160 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 A8MUI8 341 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 CLDN4O14493 209 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 MYO1DO94832 1006 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 SEMA3DO95025 777 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 MLYCDO95822 493 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 WDPCPO95876 746 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 ALPPP05187 535 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 KLK1P06870 262 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 FAM58BPP0C7Q3 252 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 ICAM2P13598 275 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 CPN2P22792 545 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 ARRB2P32121 409 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 ETV4P43268 484 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 TSFMP43897 325 aaKnown RBP10.42□□□□□ -0.74
VRK3-210ENST00000596121 PKNOX1P55347 436 aa10.42□□□□□ -0.74
VRK3-210ENST00000596121 RAE1P78406 368 aaKnown RBP10.42□□□□□ -0.74
VRK3-210ENST00000596121 PHEXP78562 749 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms