RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 MYRIPQ8NFW9 859 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 UBTD2Q8WUN7 234 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 TMEM79Q9BSE2 394 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 EHD1Q9H4M9 534 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 NT5DC2Q9H857 520 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 NECTIN3Q9NQS3 549 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 DNAJC11Q9NVH1 559 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 ZNF835Q9Y2P0 537 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 ADGRG4Q8IZF6 3080 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 A0A088AWK7 358 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 A0A1W2PPM1 405 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 SYNDIG1LA6NDD5 238 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 FAM227AF5H4B4 570 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 FCHO1O14526 889 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 CLGNO14967 610 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 TAPBPO15533 448 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 H2AFYO75367 372 aaKnown RBP16.73■□□□□ 0.27
HOMER3-208ENST00000595756 CLEC3AO75596 197 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 MTHFD2P13995 350 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 TAC1P20366 129 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 ZNF10P21506 573 aaPredicted RBP16.73■□□□□ 0.27
HOMER3-208ENST00000595756 HNRNPH1P31943 449 aaKnown RBP16.73■□□□□ 0.27
HOMER3-208ENST00000595756 GDF5P43026 501 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 HSPA7P48741 367 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 CYB561P49447 251 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 MLF1P58340 268 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 SETDB1Q15047 1291 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 C18orf21Q32NC0 220 aaPredicted RBP16.73■□□□□ 0.27
HOMER3-208ENST00000595756 BEND6Q5SZJ8 279 aaPredicted RBP16.73■□□□□ 0.27
HOMER3-208ENST00000595756 ZNF468Q5VIY5 522 aaPredicted RBP16.73■□□□□ 0.27
HOMER3-208ENST00000595756 LRIG3Q6UXM1 1119 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 BNC2Q6ZN30 1099 aaPredicted RBP16.73■□□□□ 0.27
HOMER3-208ENST00000595756 Q6ZPB1 254 aaPredicted RBP16.73■□□□□ 0.27
HOMER3-208ENST00000595756 MS4A6EQ96DS6 147 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 FAR2Q96K12 515 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 RHBGQ9H310 441 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 ZNF358Q9NW07 568 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 SENP1Q9P0U3 644 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 XPR1Q9UBH6 696 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 GRID1Q9ULK0 1009 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 DCHS2Q6V1P9 2916 aa16.73■□□□□ 0.27
HOMER3-208ENST00000595756 ARHGAP10A1A4S6 786 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 LRIT2A6NDA9 550 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 ENO4A6NNW6 628 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 STX16-NPEPL1H3BU86 382 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 GOLGA8RI6L899 631 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 K7EPI3 171 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 STX16O14662 325 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 ERI3O43414 337 aaKnown RBP16.72■□□□□ 0.27
HOMER3-208ENST00000595756 CCNT2O60583 730 aaKnown RBP16.72■□□□□ 0.27
HOMER3-208ENST00000595756 ZNF24P17028 368 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 KRT4P19013 534 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 CRHR1P34998 444 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 PIK3CGP48736 1102 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 ST13P50502 369 aaKnown RBP16.72■□□□□ 0.27
HOMER3-208ENST00000595756 HSD17B7P56937 341 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 RAB38P57729 211 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 BTN3A2P78410 334 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 PDK4Q16654 411 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 PFKFB4Q16877 469 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 ADPRMQ3LIE5 342 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 KRT71Q3SY84 523 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 CCDC153Q494R4 210 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 MRGPRGQ86SM5 289 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 APCDD1LQ8NCL9 501 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 B3GNT7Q8NFL0 401 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 CPSF2Q9P2I0 782 aaKnown RBP16.72■□□□□ 0.27
HOMER3-208ENST00000595756 OPTCQ9UBM4 332 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 SH3BGRL2Q9UJC5 107 aa16.72■□□□□ 0.27
HOMER3-208ENST00000595756 PPIEQ9UNP9 301 aaKnown RBP16.72■□□□□ 0.27
HOMER3-208ENST00000595756 COPEO14579 308 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 WISP2O76076 250 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 EPB42P16452 691 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 AGAP20933 346 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 HLCSP50747 726 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 CLCN2P51788 898 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 SLC18A2Q05940 514 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 ZNF844Q08AG5 666 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 PCBP2Q15366 365 aaKnown RBP eCLIP16.71■□□□□ 0.27
HOMER3-208ENST00000595756 C3AR1Q16581 482 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 SP5Q6BEB4 398 aaPredicted RBP16.71■□□□□ 0.27
HOMER3-208ENST00000595756 TRIM40Q6P9F5 258 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 SH2D5Q6ZV89 423 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.71■□□□□ 0.27
HOMER3-208ENST00000595756 TRABD2AQ86V40 505 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 ZNF227Q86WZ6 799 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 SPPL2CQ8IUH8 684 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 GHDCQ8N2G8 530 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 SNX31Q8N9S9 440 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 POGLUT1Q8NBL1 392 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 OR2L5Q8NG80 312 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 CCT6BQ92526 530 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 TMEM125Q96AQ2 219 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 WDR34Q96EX3 536 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 QRFPRQ96P65 431 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 DEFB126Q9BYW3 111 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 TSPAN10Q9H1Z9 355 aaPredicted RBP16.71■□□□□ 0.27
HOMER3-208ENST00000595756 TMEM216Q9P0N5 145 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 MID2Q9UJV3 735 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 TINAGQ9UJW2 476 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms