RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 OGDHLQ9ULD0 1010 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 TMCC3Q9ULS5 477 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 SLC6A14Q9UN76 642 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 SSR3Q9UNL2 185 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 ICKQ9UPZ9 632 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 MEIOCA2RUB1 952 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 FAAHO00519 579 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 TPST2O60704 377 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 POU2F1P14859 743 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 UQCRC2P22695 453 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 CXCR2P25025 360 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 SLC7A9P82251 487 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 ALDH6A1Q02252 535 aaKnown RBP12.64□□□□□ -0.39
VRK3-209ENST00000594948 C2orf80Q0P641 193 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 C1DQ13901 141 aaKnown RBP12.64□□□□□ -0.39
VRK3-209ENST00000594948 SLC5A12Q1EHB4 618 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 MPEG1Q2M385 716 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 GLYR1Q49A26 553 aaPredicted RBP12.64□□□□□ -0.39
VRK3-209ENST00000594948 SLC25A30Q5SVS4 291 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 MFSD4BQ5TF39 518 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 NXNL2Q5VZ03 156 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 BRAT1Q6PJG6 821 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 XKRXQ6PP77 449 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 GDPD1Q8N9F7 314 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 OR8J1Q8NGP2 316 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 BHMTQ93088 406 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 PDXPQ96GD0 296 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 IGSF21Q96ID5 467 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 FOPNLQ96NB1 174 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 MCOLN1Q9GZU1 580 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 ZDHHC6Q9H6R6 413 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 SYNDIG1Q9H7V2 258 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 ZNF334Q9HCZ1 680 aaPredicted RBP12.64□□□□□ -0.39
VRK3-209ENST00000594948 A4GALTQ9NPC4 353 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 EXOSC4Q9NPD3 245 aaKnown RBP12.64□□□□□ -0.39
VRK3-209ENST00000594948 DMRT3Q9NQL9 472 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 MUTYHQ9UIF7 546 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 SLC25A13Q9UJS0 675 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 MAFFQ9ULX9 164 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 CLEC4EQ9ULY5 219 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 SNX7Q9UNH6 387 aa12.64□□□□□ -0.39
VRK3-209ENST00000594948 A0A1W2PRB8 838 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 TMEM88BA6NKF7 163 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 GRM6O15303 877 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 TBX19O60806 448 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 ATG13O75143 517 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 PDE9AO76083 593 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 MFN2O95140 757 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 SLC10A3P09131 477 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 PRLHRP49683 370 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 STK19P49842 368 aaPredicted RBP12.63□□□□□ -0.39
VRK3-209ENST00000594948 SMIM11AP58511 58 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 WDR5P61964 334 aaKnown RBP12.63□□□□□ -0.39
VRK3-209ENST00000594948 SREBF2Q12772 1141 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 RAB33AQ14088 237 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 DOC2BQ14184 412 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 LARS2Q15031 903 aaKnown RBP12.63□□□□□ -0.39
VRK3-209ENST00000594948 HIST2H2AA3Q6FI13 130 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 ADNP2Q6IQ32 1131 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 GDPD4Q6W3E5 623 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 HSDL2Q6YN16 418 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 ARMCX6Q7L4S7 300 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 TCEAL8Q8IYN2 117 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 RDH10Q8IZV5 341 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 NEIL2Q969S2 332 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 NEDD4LQ96PU5 975 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 TEFMQ96QE5 360 aaKnown RBP12.63□□□□□ -0.39
VRK3-209ENST00000594948 MED18Q9BUE0 208 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 ZSCAN5AQ9BUG6 496 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 CD84Q9UIB8 345 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 RAB23Q9ULC3 237 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 DYRK1BQ9Y463 629 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 MAP4K5Q9Y4K4 846 aa12.63□□□□□ -0.39
VRK3-209ENST00000594948 PITPNM1O00562 1244 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 RGS5O15539 181 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 SLC16A8O95907 504 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 SOD2P04179 222 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 ALPPP05187 535 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 YES1P07947 543 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 C1GALT1C1LP0DN25 315 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 IRS1P35568 1242 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 CTSOP43234 321 aaPredicted RBP12.62□□□□□ -0.39
VRK3-209ENST00000594948 BDKRB1P46663 353 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 MRPS15P82914 257 aaKnown RBP12.62□□□□□ -0.39
VRK3-209ENST00000594948 GANABQ14697 944 aaKnown RBP12.62□□□□□ -0.39
VRK3-209ENST00000594948 BAK1Q16611 211 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 CCSMST1Q4G0I0 132 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 HENMT1Q5T8I9 393 aaKnown RBP12.62□□□□□ -0.39
VRK3-209ENST00000594948 TXNDC8Q6A555 127 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 CASP12Q6UXS9 341 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 DPY19L3Q6ZPD9 716 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 OTOP2Q7RTS6 562 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 NANOGNBQ7Z5D8 188 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 TMPRSS11BQ86T26 416 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 DDX53Q86TM3 631 aaKnown RBP12.62□□□□□ -0.39
VRK3-209ENST00000594948 GALNT12Q8IXK2 581 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 HS6ST3Q8IZP7 471 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 SLC34A3Q8N130 599 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 VWA5B2Q8N398 1253 aa12.62□□□□□ -0.39
VRK3-209ENST00000594948 SLC7A6Q92536 515 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms