RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 ATP6V1HQ9UI12 483 aa17.17■□□□□ 0.34
SPC24-206ENST00000592540 KLHL21Q9UJP4 597 aa17.17■□□□□ 0.34
SPC24-206ENST00000592540 RAB23Q9ULC3 237 aa17.17■□□□□ 0.34
SPC24-206ENST00000592540 RPL36Q9Y3U8 105 aaKnown RBP17.17■□□□□ 0.34
SPC24-206ENST00000592540 MAP4K5Q9Y4K4 846 aa17.17■□□□□ 0.34
SPC24-206ENST00000592540 ANAPC1Q9H1A4 1944 aa17.17■□□□□ 0.34
SPC24-206ENST00000592540 TRBV4-1A0A0J9YWV2 114 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 POLR1CO15160 346 aaPredicted RBP17.16■□□□□ 0.34
SPC24-206ENST00000592540 AP2A2O94973 939 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 IFNW1P05000 195 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 ASGR1P07306 291 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 CCNYL3P0C7X3 344 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 ZNF8P17098 575 aaPredicted RBP17.16■□□□□ 0.34
SPC24-206ENST00000592540 PCBP3P57721 371 aaKnown RBP17.16■□□□□ 0.34
SPC24-206ENST00000592540 NKX3-2P78367 333 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 ZNF91Q05481 1191 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 ZNF630Q2M218 657 aaPredicted RBP17.16■□□□□ 0.34
SPC24-206ENST00000592540 TRIM40Q6P9F5 258 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 WDR53Q7Z5U6 358 aaPredicted RBP17.16■□□□□ 0.34
SPC24-206ENST00000592540 CLP1Q92989 425 aaKnown RBP17.16■□□□□ 0.34
SPC24-206ENST00000592540 CXorf40BQ96DE9 158 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 LYSMD1Q96S90 227 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 ZIC5Q96T25 663 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 UCK2Q9BZX2 261 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 ARHGAP39Q9C0H5 1083 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 FAM83DQ9H4H8 585 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 TOR4AQ9NXH8 423 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 NDOR1Q9UHB4 597 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 ICMTO60725 284 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 SOX14O95416 240 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 ADAP00813 363 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 SSTR4P31391 388 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 GZMKP49863 264 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 ILKQ13418 452 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 C1DQ13901 141 aaKnown RBP17.16■□□□□ 0.34
SPC24-206ENST00000592540 KCNC3Q14003 757 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 GPR19Q15760 415 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 DDI2Q5TDH0 399 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 RNLSQ5VYX0 342 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 TIGD3Q6B0B8 471 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 RETSATQ6NUM9 610 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 FUT10Q6P4F1 479 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 PRSS55Q6UWB4 352 aaPredicted RBP17.16■□□□□ 0.34
SPC24-206ENST00000592540 TPRG1Q6ZUI0 275 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 GPR65Q8IYL9 337 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 FBXO22Q8NEZ5 403 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 OR5AK3PQ8NH89 298 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 HUS1BQ8NHY5 278 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 SNAPC3Q92966 411 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 CIDECQ96AQ7 238 aaPredicted RBP17.16■□□□□ 0.34
SPC24-206ENST00000592540 CITED4Q96RK1 184 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 TSSK6Q9BXA6 273 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 TMEM121BQ9BXQ6 578 aaPredicted RBP17.16■□□□□ 0.34
SPC24-206ENST00000592540 REEP4Q9H6H4 257 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 KCND3Q9UK17 655 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 TMPRSS11EQ9UL52 423 aa17.16■□□□□ 0.34
SPC24-206ENST00000592540 FFAR1O14842 300 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 MYL12BO14950 172 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 ADAM12O43184 909 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 ARHGEF9O43307 516 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 MAPK8P45983 427 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 PTSQ03393 145 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 SLC5A12Q1EHB4 618 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 C22orf42Q6IC83 251 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 HSDL2Q6YN16 418 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 BCDIN3DQ7Z5W3 292 aaKnown RBP17.15■□□□□ 0.34
SPC24-206ENST00000592540 PLCZ1Q86YW0 608 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 NLGN4YQ8NFZ3 816 aaPredicted RBP17.15■□□□□ 0.34
SPC24-206ENST00000592540 OR7G3Q8NG95 312 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 KIAA1143Q96AT1 154 aaPredicted RBP17.15■□□□□ 0.34
SPC24-206ENST00000592540 MED8Q96G25 268 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 PKP4Q99569 1192 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 TRPM5Q9NZQ8 1165 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 STOML2Q9UJZ1 356 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.15■□□□□ 0.34
SPC24-206ENST00000592540 ARAFP10398 606 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 ATP1B2P14415 290 aaPredicted RBP17.15■□□□□ 0.34
SPC24-206ENST00000592540 HMGA1P17096 107 aaKnown RBP17.15■□□□□ 0.34
SPC24-206ENST00000592540 ALAS2P22557 587 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 CHI3L1P36222 383 aaPredicted RBP17.15■□□□□ 0.34
SPC24-206ENST00000592540 CSNK1DP48730 415 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 LIM2P55344 173 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 RPS13P62277 151 aaKnown RBP17.15■□□□□ 0.34
SPC24-206ENST00000592540 TNK1Q13470 666 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 MADCAM1Q13477 382 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 NAE1Q13564 534 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 PUM1Q14671 1186 aaKnown RBP eCLIP17.15■□□□□ 0.34
SPC24-206ENST00000592540 TATDN3Q17R31 274 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 LCN1P1Q5VSP4 162 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 C12orf73Q69YU5 71 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 TAS1R1Q7RTX1 841 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 TTC9Q92623 222 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 OR4K3Q96R72 315 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 NELL2Q99435 816 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 WRAP53Q9BUR4 548 aaKnown RBP17.15■□□□□ 0.34
SPC24-206ENST00000592540 C2orf49Q9BVC5 232 aaPredicted RBP17.15■□□□□ 0.34
SPC24-206ENST00000592540 RC3H2Q9HBD1 1191 aaKnown RBP17.15■□□□□ 0.34
SPC24-206ENST00000592540 ANGPT4Q9Y264 503 aa17.15■□□□□ 0.34
SPC24-206ENST00000592540 H7C4K7 107 aa17.14■□□□□ 0.33
SPC24-206ENST00000592540 MYCP01106 439 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms