RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 NCLNQ969V3 563 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 VMP1Q96GC9 406 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 IPPKQ9H8X2 491 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 DMRT3Q9NQL9 472 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 ADGRE2Q9UHX3 823 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 FBXW2Q9UKT8 454 aa12.95□□□□□ -0.34
APOC1-208ENST00000592535 PPIEQ9UNP9 301 aaKnown RBP12.95□□□□□ -0.34
APOC1-208ENST00000592535 TNPO3Q9Y5L0 923 aaKnown RBP12.95□□□□□ -0.34
APOC1-208ENST00000592535 PRKNO60260 465 aaPredicted RBP12.94□□□□□ -0.34
APOC1-208ENST00000592535 LDB3O75112 727 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 KRT38O76015 456 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 CLDN1O95832 211 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 IFNA16P05015 189 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 STSP08842 583 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 RBP1P09455 135 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 PIK3CBP42338 1070 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 CYB561P49447 251 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 RPS13P62277 151 aaKnown RBP12.94□□□□□ -0.34
APOC1-208ENST00000592535 ID2Q02363 134 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 ELAVL1Q15717 326 aaKnown RBP12.94□□□□□ -0.34
APOC1-208ENST00000592535 CPSF6Q16630 551 aaKnown RBP eCLIP12.94□□□□□ -0.34
APOC1-208ENST00000592535 C1QL3Q5VWW1 255 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 OR4C11Q6IEV9 310 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 HORMAD2Q8N7B1 307 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 PHF21BQ96EK2 531 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 SCYL1Q96KG9 808 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 MTERF1Q99551 399 aaKnown RBP12.94□□□□□ -0.34
APOC1-208ENST00000592535 ALOXE3Q9BYJ1 711 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 TRIM45Q9H8W5 580 aaPredicted RBP12.94□□□□□ -0.34
APOC1-208ENST00000592535 XPR1Q9UBH6 696 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 SEC14L3Q9UDX4 400 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 ZNF180Q9UJW8 692 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 RNF11Q9Y3C5 154 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 TSC22D4Q9Y3Q8 395 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 PCDHGA11Q9Y5H2 935 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 MYO7BQ6PIF6 2116 aa12.94□□□□□ -0.34
APOC1-208ENST00000592535 DOPEY1Q5JWR5 2465 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 ASPDHA6ND91 283 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 H0YIV9 168 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 PLPP1O14494 284 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 CDK2AP1O14519 115 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 FCHO1O14526 889 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 OR7A17O14581 309 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 UGDHO60701 494 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 SLC25A12O75746 678 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 CPN2P22792 545 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 CNTFP26441 200 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 TRHRP34981 398 aaPredicted RBP12.93□□□□□ -0.34
APOC1-208ENST00000592535 PIK3CGP48736 1102 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 HLCSP50747 726 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 RAP1GDS1P52306 607 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 STX4Q12846 297 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 SLAMF1Q13291 335 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 MAPKAPK3Q16644 382 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 TSNAXIP1Q2TAA8 658 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 METTL2BQ6P1Q9 378 aaKnown RBP12.93□□□□□ -0.34
APOC1-208ENST00000592535 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.93□□□□□ -0.34
APOC1-208ENST00000592535 FJX1Q86VR8 437 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 TMEM132CQ8N3T6 1108 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 L3MBTL4Q8NA19 623 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 PTPMT1Q8WUK0 201 aaPredicted RBP12.93□□□□□ -0.34
APOC1-208ENST00000592535 SREK1Q8WXA9 508 aaKnown RBP12.93□□□□□ -0.34
APOC1-208ENST00000592535 RGMAQ96B86 450 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 ANKRD9Q96BM1 317 aaPredicted RBP12.93□□□□□ -0.34
APOC1-208ENST00000592535 FRMD6Q96NE9 622 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 CDK15Q96Q40 435 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 TSPAN10Q9H1Z9 355 aaPredicted RBP12.93□□□□□ -0.34
APOC1-208ENST00000592535 NOL11Q9H8H0 719 aaKnown RBP12.93□□□□□ -0.34
APOC1-208ENST00000592535 VTI1BQ9UEU0 232 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 CLCA3PQ9Y6N3 262 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 SPACA6W5XKT8 324 aa12.93□□□□□ -0.34
APOC1-208ENST00000592535 UTP20O75691 2785 aaKnown RBP12.93□□□□□ -0.34
APOC1-208ENST00000592535 EML6Q6ZMW3 1958 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 EXOC1LA0A1B0GW35 172 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 SYNDIG1LA6NDD5 238 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 STX16-NPEPL1H3BU86 382 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 STX16O14662 325 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 FGF17O60258 216 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 NME2P1O60361 137 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 ITGA10O75578 1167 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 ZFAND5O76080 213 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 CLDN9O95484 217 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 ETHE1O95571 254 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 ABHD2P08910 425 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 RHOXF2BP0C7M4 288 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 COL6A2P12110 1019 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 TNNI3P19429 210 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 NME2P22392 152 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 COL8A1P27658 744 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 GCAP28676 217 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 ARL1P40616 181 aaPredicted RBP12.92□□□□□ -0.34
APOC1-208ENST00000592535 NEK2P51955 445 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 HNRNPH2P55795 449 aaKnown RBP12.92□□□□□ -0.34
APOC1-208ENST00000592535 PER3P56645 1201 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 PHEXP78562 749 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 ALDH6A1Q02252 535 aaKnown RBP12.92□□□□□ -0.34
APOC1-208ENST00000592535 SERTAD2Q14140 314 aa12.92□□□□□ -0.34
APOC1-208ENST00000592535 ZRSR2Q15696 482 aaKnown RBP12.92□□□□□ -0.34
APOC1-208ENST00000592535 C16orf47Q6ZP98 133 aaPredicted RBP12.92□□□□□ -0.34
APOC1-208ENST00000592535 MAMDC2Q7Z304 686 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms