RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 CEP104O60308 925 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 GAS8O95995 478 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 TK1P04183 234 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 CHRM5P08912 532 aaPredicted RBP7.17□□□□□ -1.26
VMP1-213ENST00000591877 PKLRP30613 574 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 SHMT2P34897 504 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 NPY2RP49146 381 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 PRAMEP78395 509 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 BASP1P80723 227 aaKnown RBP7.17□□□□□ -1.26
VMP1-213ENST00000591877 PLOD1Q02809 727 aaPredicted RBP7.17□□□□□ -1.26
VMP1-213ENST00000591877 HSPA14Q0VDF9 509 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 TRIP13Q15645 432 aaPredicted RBP7.17□□□□□ -1.26
VMP1-213ENST00000591877 KYNUQ16719 465 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 DEFB110Q30KQ9 67 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 PTCHD3Q3KNS1 767 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 FASTKD1Q53R41 847 aaKnown RBP7.17□□□□□ -1.26
VMP1-213ENST00000591877 SFRP4Q6FHJ7 346 aaPredicted RBP7.17□□□□□ -1.26
VMP1-213ENST00000591877 FAAH2Q6GMR7 532 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 FAM198BQ6UWH4 519 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 SYVN1Q86TM6 617 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 APLFQ8IW19 511 aaPredicted RBP7.17□□□□□ -1.26
VMP1-213ENST00000591877 TRIM58Q8NG06 486 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 CPT1BQ92523 772 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 MR1Q95460 341 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.17□□□□□ -1.26
VMP1-213ENST00000591877 MIEF2Q96C03 454 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 LRRC37BQ96QE4 947 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 PTDSS2Q9BVG9 487 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 KIFC1Q9BW19 673 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 GPR87Q9BY21 358 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 SPRTNQ9H040 489 aaPredicted RBP7.17□□□□□ -1.26
VMP1-213ENST00000591877 SYTL2Q9HCH5 934 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 SYBUQ9NX95 663 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 DNAJB11Q9UBS4 358 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 LPAR3Q9UBY5 353 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 CIDEBQ9UHD4 219 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 POLG2Q9UHN1 485 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 TLK1Q9UKI8 766 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 TTC7AQ9ULT0 858 aaPredicted RBP7.17□□□□□ -1.26
VMP1-213ENST00000591877 NFU1Q9UMS0 254 aa7.17□□□□□ -1.26
VMP1-213ENST00000591877 HECTD1Q9ULT8 2610 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 A0A0J9YY10 115 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 KRT87PA6NCN2 255 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 HMX3A6NHT5 357 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 B9A039 149 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 GOLGA8KD6RF30 607 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 GOLGA8TH3BQL2 631 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 PRMT5O14744 637 aaPredicted RBP7.16□□□□□ -1.26
VMP1-213ENST00000591877 ZNF749O43361 778 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 AVILO75366 819 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 TMEM63AO94886 807 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 SLCO2B1O94956 709 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 RASAL1O95294 804 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 KLK3P07288 261 aaPredicted RBP7.16□□□□□ -1.26
VMP1-213ENST00000591877 RAB40ALP0C0E4 278 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 CBSLP0DN79 551 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 TPSB2P20231 275 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 RPS3P23396 243 aaKnown RBP eCLIP7.16□□□□□ -1.264e-6■■■■□ 22.6
VMP1-213ENST00000591877 CBSP35520 551 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 MAGEA6P43360 314 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 CSRP3P50461 194 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 ZNF134P52741 427 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 TERF1P54274 439 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 PMS2P54278 862 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 RPS15P62841 145 aaKnown RBP7.16□□□□□ -1.26
VMP1-213ENST00000591877 GPS1Q13098 491 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 CHAF1BQ13112 559 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 KCNJ11Q14654 390 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 TPSAB1Q15661 275 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 SLC5A12Q1EHB4 618 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 ZIK1Q3SY52 487 aaPredicted RBP7.16□□□□□ -1.26
VMP1-213ENST00000591877 CCSMST1Q4G0I0 132 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 SYTL3Q4VX76 610 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 LACTB2Q53H82 288 aaPredicted RBP7.16□□□□□ -1.26
VMP1-213ENST00000591877 DNAJC21Q5F1R6 531 aaKnown RBP7.16□□□□□ -1.26
VMP1-213ENST00000591877 CTSL3PQ5NE16 218 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 ANKRD22Q5VYY1 191 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 ABLIM2Q6H8Q1 611 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 TCTN3Q6NUS6 607 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 LRRC8BQ6P9F7 803 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 C4orf22Q6V702 233 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 C1orf122Q6ZSJ8 110 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 GSTA5Q7RTV2 222 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 KCTD20Q7Z5Y7 419 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 CAND1Q86VP6 1230 aaKnown RBP7.16□□□□□ -1.26
VMP1-213ENST00000591877 CPOQ8IVL8 374 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 SPARTQ8N0X7 666 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 Q8N1X5 172 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 RASGEF1CQ8N431 466 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 DNAJC22Q8N4W6 341 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 ENDOVQ8N8Q3 282 aaKnown RBP7.16□□□□□ -1.26
VMP1-213ENST00000591877 PCYOX1LQ8NBM8 494 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 OR1N1Q8NGS0 311 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 MBD3L2Q8NHZ7 208 aaPredicted RBP7.16□□□□□ -1.26
VMP1-213ENST00000591877 ABHD5Q8WTS1 349 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 MAIP1Q8WWC4 291 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 MARS2Q96GW9 593 aaKnown RBP7.16□□□□□ -1.26
VMP1-213ENST00000591877 MS4A14Q96JA4 679 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 BIRC8Q96P09 236 aa7.16□□□□□ -1.26
VMP1-213ENST00000591877 IL17FQ96PD4 163 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms